Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC22.32■■□□□ 1.16
RTL9Q8NET4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL9Q8NET4 FAM197Y8-203ENST00000450145 560 ntBASIC22.32■■□□□ 1.16
RTL9Q8NET4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
RTL9Q8NET4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.32■■□□□ 1.16
RTL9Q8NET4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL9Q8NET4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC22.32■■□□□ 1.16
RTL9Q8NET4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.32■■□□□ 1.16
RTL9Q8NET4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTL9Q8NET4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
RTL9Q8NET4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.32■■□□□ 1.16
RTL9Q8NET4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL9Q8NET4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
RTL9Q8NET4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL9Q8NET4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL9Q8NET4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTL9Q8NET4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTL9Q8NET4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTL9Q8NET4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTL9Q8NET4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 AC073592.3-201ENST00000625118 1834 ntBASIC22.31■■□□□ 1.16
RTL9Q8NET4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTL9Q8NET4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC22.31■■□□□ 1.16
RTL9Q8NET4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTL9Q8NET4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTL9Q8NET4 ESPNP-201ENST00000270691 2015 ntBASIC22.31■■□□□ 1.16
RTL9Q8NET4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 AC093010.1-201ENST00000473625 1624 ntBASIC22.31■■□□□ 1.16
RTL9Q8NET4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTL9Q8NET4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.31■■□□□ 1.16
RTL9Q8NET4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTL9Q8NET4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTL9Q8NET4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTL9Q8NET4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTL9Q8NET4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTL9Q8NET4 MED22-202ENST00000371999 987 ntTSL 3 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTL9Q8NET4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC22.3■■□□□ 1.16
RTL9Q8NET4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTL9Q8NET4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTL9Q8NET4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTL9Q8NET4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTL9Q8NET4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.3■■□□□ 1.16
RTL9Q8NET4 AC243591.1-201ENST00000452967 1364 ntBASIC22.3■■□□□ 1.16
RTL9Q8NET4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTL9Q8NET4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RTL9Q8NET4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RTL9Q8NET4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.29■■□□□ 1.16
RTL9Q8NET4 AL031284.1-201ENST00000419297 478 ntBASIC22.29■■□□□ 1.16
RTL9Q8NET4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.29■■□□□ 1.16
RTL9Q8NET4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RTL9Q8NET4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC22.29■■□□□ 1.16
RTL9Q8NET4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC22.29■■□□□ 1.16
RTL9Q8NET4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC22.29■■□□□ 1.16
RTL9Q8NET4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTL9Q8NET4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RTL9Q8NET4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTL9Q8NET4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC22.29■■□□□ 1.16
RTL9Q8NET4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
RTL9Q8NET4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RTL9Q8NET4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.29■■□□□ 1.16
RTL9Q8NET4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
RTL9Q8NET4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.29■■□□□ 1.16
RTL9Q8NET4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.28■■□□□ 1.16
RTL9Q8NET4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.28■■□□□ 1.16
RTL9Q8NET4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTL9Q8NET4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RTL9Q8NET4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
RTL9Q8NET4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC22.28■■□□□ 1.16
RTL9Q8NET4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTL9Q8NET4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTL9Q8NET4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTL9Q8NET4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms