Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 MIR3180-1-201ENST00000580374 94 ntBASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 MIR3180-3-201ENST00000584616 94 ntBASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 LINC00167-201ENST00000530583 1419 ntBASIC17.81■□□□□ 0.44
LRRTM4Q86VH4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 DRAXINP1-201ENST00000437611 948 ntBASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 RN7SL606P-201ENST00000472779 293 ntBASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 TPSP2-201ENST00000561760 610 ntBASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM4Q86VH4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 AC009154.2-201ENST00000621177 724 ntBASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRTM4Q86VH4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM4Q86VH4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms