Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 AC010654.1-201ENST00000615722 808 ntBASIC17.56■□□□□ 0.4
RIF1Q5UIP0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RIF1Q5UIP0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 AC092667.1-201ENST00000434301 2586 ntBASIC17.55■□□□□ 0.4
RIF1Q5UIP0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 Z98044.1-201ENST00000632503 1764 ntBASIC17.55■□□□□ 0.4
RIF1Q5UIP0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.55■□□□□ 0.4
RIF1Q5UIP0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 AC073314.1-201ENST00000568729 2216 ntBASIC17.54■□□□□ 0.4
RIF1Q5UIP0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 AL589182.2-201ENST00000619332 1049 ntBASIC17.54■□□□□ 0.4
RIF1Q5UIP0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 AC091812.2-201ENST00000619081 385 ntBASIC17.54■□□□□ 0.4
RIF1Q5UIP0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.54■□□□□ 0.4
RIF1Q5UIP0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 ATP5G2P4-201ENST00000442175 420 ntBASIC17.53■□□□□ 0.4
RIF1Q5UIP0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.53■□□□□ 0.4
RIF1Q5UIP0 RHOQP3-201ENST00000437982 621 ntBASIC17.53■□□□□ 0.4
RIF1Q5UIP0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIF1Q5UIP0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RIF1Q5UIP0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RIF1Q5UIP0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.52■□□□□ 0.4
RIF1Q5UIP0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RIF1Q5UIP0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.52■□□□□ 0.4
RIF1Q5UIP0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RIF1Q5UIP0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RIF1Q5UIP0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIF1Q5UIP0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIF1Q5UIP0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.52■□□□□ 0.4
RIF1Q5UIP0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms