Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.64■□□□□ 0.89
TM4SF4P48230 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF4P48230 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF4P48230 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF4P48230 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF4P48230 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.64■□□□□ 0.89
TM4SF4P48230 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF4P48230 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.64■□□□□ 0.89
TM4SF4P48230 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF4P48230 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF4P48230 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TM4SF4P48230 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.64■□□□□ 0.89
TM4SF4P48230 ELK2BP-201ENST00000415014 1224 ntBASIC20.64■□□□□ 0.89
TM4SF4P48230 AC096633.1-201ENST00000422446 749 ntBASIC20.64■□□□□ 0.89
TM4SF4P48230 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TM4SF4P48230 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TM4SF4P48230 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.64■□□□□ 0.89
TM4SF4P48230 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.64■□□□□ 0.89
TM4SF4P48230 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.64■□□□□ 0.89
TM4SF4P48230 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TM4SF4P48230 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF4P48230 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF4P48230 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF4P48230 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF4P48230 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.63■□□□□ 0.89
TM4SF4P48230 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.63■□□□□ 0.89
TM4SF4P48230 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TM4SF4P48230 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.63■□□□□ 0.89
TM4SF4P48230 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TM4SF4P48230 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.63■□□□□ 0.89
TM4SF4P48230 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 HLA-J-202ENST00000469281 1241 ntBASIC20.63■□□□□ 0.89
TM4SF4P48230 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TM4SF4P48230 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.63■□□□□ 0.89
TM4SF4P48230 AC004877.2-201ENST00000623941 599 ntBASIC20.63■□□□□ 0.89
TM4SF4P48230 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.63■□□□□ 0.89
TM4SF4P48230 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF4P48230 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.63■□□□□ 0.89
TM4SF4P48230 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.62■□□□□ 0.89
TM4SF4P48230 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.62■□□□□ 0.89
TM4SF4P48230 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TM4SF4P48230 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF4P48230 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF4P48230 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.62■□□□□ 0.89
TM4SF4P48230 IGLL3P-201ENST00000412472 434 ntBASIC20.62■□□□□ 0.89
TM4SF4P48230 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.62■□□□□ 0.89
TM4SF4P48230 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.62■□□□□ 0.89
TM4SF4P48230 AC190387.1-201ENST00000551683 408 ntBASIC20.62■□□□□ 0.89
TM4SF4P48230 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.62■□□□□ 0.89
TM4SF4P48230 MIR4745-201ENST00000577608 62 ntBASIC20.62■□□□□ 0.89
TM4SF4P48230 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.62■□□□□ 0.89
TM4SF4P48230 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.62■□□□□ 0.89
TM4SF4P48230 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.62■□□□□ 0.89
TM4SF4P48230 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF4P48230 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TM4SF4P48230 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF4P48230 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.62■□□□□ 0.89
TM4SF4P48230 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF4P48230 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TM4SF4P48230 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.61■□□□□ 0.89
TM4SF4P48230 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TM4SF4P48230 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 AC125437.2-201ENST00000625180 2167 ntBASIC20.61■□□□□ 0.89
TM4SF4P48230 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.61■□□□□ 0.89
TM4SF4P48230 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.61■□□□□ 0.89
TM4SF4P48230 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.61■□□□□ 0.89
TM4SF4P48230 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 RPS15P9-201ENST00000494093 319 ntBASIC20.61■□□□□ 0.89
TM4SF4P48230 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.61■□□□□ 0.89
TM4SF4P48230 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.61■□□□□ 0.89
TM4SF4P48230 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.61■□□□□ 0.89
TM4SF4P48230 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.61■□□□□ 0.89
TM4SF4P48230 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TM4SF4P48230 AC004835.2-201ENST00000603762 682 ntBASIC20.61■□□□□ 0.89
TM4SF4P48230 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF4P48230 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms