Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTNND1O60716 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTNND1O60716 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTNND1O60716 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTNND1O60716 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTNND1O60716 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CTNND1O60716 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTNND1O60716 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CTNND1O60716 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.2■□□□□ 0.98
CTNND1O60716 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CTNND1O60716 KRT18P13-201ENST00000400056 1290 ntBASIC21.2■□□□□ 0.98
CTNND1O60716 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTNND1O60716 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.2■□□□□ 0.98
CTNND1O60716 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.2■□□□□ 0.98
CTNND1O60716 AC116407.3-201ENST00000623905 1129 ntBASIC21.2■□□□□ 0.98
CTNND1O60716 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTNND1O60716 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.2■□□□□ 0.98
CTNND1O60716 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.2■□□□□ 0.98
CTNND1O60716 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTNND1O60716 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTNND1O60716 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.2■□□□□ 0.98
CTNND1O60716 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.19■□□□□ 0.98
CTNND1O60716 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.19■□□□□ 0.98
CTNND1O60716 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CTNND1O60716 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CTNND1O60716 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.19■□□□□ 0.98
CTNND1O60716 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.19■□□□□ 0.98
CTNND1O60716 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.19■□□□□ 0.98
CTNND1O60716 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.19■□□□□ 0.98
CTNND1O60716 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.19■□□□□ 0.98
CTNND1O60716 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.19■□□□□ 0.98
CTNND1O60716 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CTNND1O60716 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.19■□□□□ 0.98
CTNND1O60716 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTNND1O60716 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.19■□□□□ 0.98
CTNND1O60716 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CTNND1O60716 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.19■□□□□ 0.98
CTNND1O60716 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.19■□□□□ 0.98
CTNND1O60716 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTNND1O60716 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTNND1O60716 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.18■□□□□ 0.98
CTNND1O60716 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.18■□□□□ 0.98
CTNND1O60716 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTNND1O60716 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.18■□□□□ 0.98
CTNND1O60716 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTNND1O60716 AC021087.4-201ENST00000563761 564 ntBASIC21.18■□□□□ 0.98
CTNND1O60716 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTNND1O60716 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.18■□□□□ 0.98
CTNND1O60716 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTNND1O60716 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTNND1O60716 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.18■□□□□ 0.98
CTNND1O60716 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTNND1O60716 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CTNND1O60716 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.17■□□□□ 0.98
CTNND1O60716 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTNND1O60716 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTNND1O60716 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CTNND1O60716 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.17■□□□□ 0.98
CTNND1O60716 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.17■□□□□ 0.98
CTNND1O60716 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.17■□□□□ 0.98
CTNND1O60716 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.17■□□□□ 0.98
CTNND1O60716 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTNND1O60716 ZNF259P1-201ENST00000407656 1365 ntBASIC21.17■□□□□ 0.98
CTNND1O60716 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTNND1O60716 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTNND1O60716 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.17■□□□□ 0.98
CTNND1O60716 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.17■□□□□ 0.98
CTNND1O60716 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTNND1O60716 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTNND1O60716 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.17■□□□□ 0.98
CTNND1O60716 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTNND1O60716 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CTNND1O60716 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CTNND1O60716 PMS2P7-201ENST00000506558 1336 ntBASIC21.16■□□□□ 0.98
CTNND1O60716 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.16■□□□□ 0.98
CTNND1O60716 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.16■□□□□ 0.98
CTNND1O60716 AC112698.1-201ENST00000510299 916 ntBASIC21.16■□□□□ 0.98
CTNND1O60716 POLD2P1-201ENST00000511220 997 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms