Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC135776.1-201ENST00000319817 2481 ntBASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 PRORSD1P-201ENST00000295112 541 ntBASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 MESTP1-201ENST00000404287 994 ntBASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 CD177P1-201ENST00000606252 935 ntBASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC142381.4-202ENST00000563973 229 ntBASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 AP000692.2-201ENST00000608391 879 ntBASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF103-CHMP3A0A140T963 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 PCDHA12-202ENST00000613593 2588 ntBASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC112777.1-201ENST00000540175 1423 ntBASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF103-CHMP3A0A140T963 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF103-CHMP3A0A140T963 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms