Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TREX1Q9NSU2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TREX1Q9NSU2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TREX1Q9NSU2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TREX1Q9NSU2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TREX1Q9NSU2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TREX1Q9NSU2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 LIN28AP1-201ENST00000429574 405 ntBASIC18.16■□□□□ 0.5
TREX1Q9NSU2 RASA4DP-201ENST00000460726 1199 ntBASIC18.16■□□□□ 0.5
TREX1Q9NSU2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 COX11P1-201ENST00000489116 835 ntBASIC18.16■□□□□ 0.5
TREX1Q9NSU2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 AC034232.1-201ENST00000506026 1064 ntBASIC18.16■□□□□ 0.5
TREX1Q9NSU2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 AC008687.5-201ENST00000593746 558 ntBASIC18.16■□□□□ 0.5
TREX1Q9NSU2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 AC005363.2-201ENST00000618631 242 ntBASIC18.16■□□□□ 0.5
TREX1Q9NSU2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.16■□□□□ 0.5
TREX1Q9NSU2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.15■□□□□ 0.5
TREX1Q9NSU2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 AC079602.3-201ENST00000623931 403 ntBASIC18.15■□□□□ 0.5
TREX1Q9NSU2 AL031432.5-201ENST00000641059 760 ntBASIC18.15■□□□□ 0.5
TREX1Q9NSU2 AC006116.8-202ENST00000587620 1550 ntBASIC18.15■□□□□ 0.5
TREX1Q9NSU2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TREX1Q9NSU2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
TREX1Q9NSU2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
TREX1Q9NSU2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TREX1Q9NSU2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 AL137013.1-201ENST00000432946 1228 ntBASIC18.14■□□□□ 0.49
TREX1Q9NSU2 ATP5G1P1-201ENST00000448724 379 ntBASIC18.14■□□□□ 0.49
TREX1Q9NSU2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 AC140113.3-201ENST00000605663 199 ntBASIC18.14■□□□□ 0.49
TREX1Q9NSU2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 AC011558.1-201ENST00000623459 338 ntBASIC18.14■□□□□ 0.49
TREX1Q9NSU2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.14■□□□□ 0.49
TREX1Q9NSU2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TREX1Q9NSU2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TREX1Q9NSU2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TREX1Q9NSU2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms