Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ATP6V0A4Q9HBG4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A4Q9HBG4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A4Q9HBG4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A4Q9HBG4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A4Q9HBG4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A4Q9HBG4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A4Q9HBG4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A4Q9HBG4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A4Q9HBG4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A4Q9HBG4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A4Q9HBG4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A4Q9HBG4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 LINC01126-201ENST00000623515 1646 ntBASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 AL138781.2-201ENST00000617896 1843 ntBASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A4Q9HBG4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 GMCL1P1-201ENST00000463439 1581 ntBASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 AC113404.2-201ENST00000507884 177 ntBASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 KRT18P1-202ENST00000452408 1331 ntBASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A4Q9HBG4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 AC004263.2-201ENST00000617183 678 ntBASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 AL353692.3-201ENST00000407031 1396 ntBASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A4Q9HBG4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms