Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 MIR574-201ENST00000385209 96 ntBASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 GPALPP1-207ENST00000611650 899 ntBASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 MIR7706-201ENST00000613747 67 ntBASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP3Q9H6T3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 PMS2P1-201ENST00000431037 1228 ntBASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 HNRNPDP1-201ENST00000439535 754 ntBASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 AC093909.1-201ENST00000504731 1122 ntBASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 AC112698.1-201ENST00000510299 916 ntBASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 AC006538.3-201ENST00000612495 578 ntBASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.9■□□□□ 0.94
RPAP3Q9H6T3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPAP3Q9H6T3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RPAP3Q9H6T3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPAP3Q9H6T3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPAP3Q9H6T3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.89■□□□□ 0.94
RPAP3Q9H6T3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 FAM215A-202ENST00000632077 792 ntBASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP3Q9H6T3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 SCARNA2-201ENST00000458748 420 ntBASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP3Q9H6T3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 AP005117.1-201ENST00000584346 1413 ntBASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms