Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.96■□□□□ 0.14
RPS4Y2Q8TD47 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.96■□□□□ 0.14
RPS4Y2Q8TD47 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 KRT8P7-201ENST00000533003 1432 ntBASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 AL023806.1-201ENST00000603994 1649 ntBASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 PCDHA12-202ENST00000613593 2588 ntBASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPS4Y2Q8TD47 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 DUTP2-201ENST00000519164 463 ntBASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 AL138688.1-201ENST00000624851 1594 ntBASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 AL024508.2-201ENST00000607749 1894 ntBASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RPS4Y2Q8TD47 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 MIR718-201ENST00000390190 70 ntBASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 MFAP1P1-201ENST00000442257 1255 ntBASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 AC093827.2-201ENST00000512654 315 ntBASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPS4Y2Q8TD47 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms