Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH17Q12864 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH17Q12864 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH17Q12864 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH17Q12864 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
CDH17Q12864 AC141257.4-201ENST00000634557 245 ntBASIC18.42■□□□□ 0.54
CDH17Q12864 AC136944.6-201ENST00000634818 245 ntBASIC18.42■□□□□ 0.54
CDH17Q12864 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH17Q12864 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH17Q12864 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CDH17Q12864 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDH17Q12864 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH17Q12864 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH17Q12864 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDH17Q12864 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.41■□□□□ 0.54
CDH17Q12864 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDH17Q12864 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH17Q12864 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH17Q12864 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH17Q12864 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDH17Q12864 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CDH17Q12864 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH17Q12864 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH17Q12864 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH17Q12864 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH17Q12864 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH17Q12864 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CDH17Q12864 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH17Q12864 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH17Q12864 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH17Q12864 SLC25A3P1-201ENST00000443844 931 ntBASIC18.4■□□□□ 0.54
CDH17Q12864 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.4■□□□□ 0.54
CDH17Q12864 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.4■□□□□ 0.54
CDH17Q12864 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH17Q12864 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH17Q12864 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH17Q12864 AL138966.2-201ENST00000621997 464 ntBASIC18.4■□□□□ 0.54
CDH17Q12864 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH17Q12864 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH17Q12864 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.4■□□□□ 0.54
CDH17Q12864 AP000997.3-201ENST00000623333 2250 ntBASIC18.4■□□□□ 0.54
CDH17Q12864 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CDH17Q12864 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH17Q12864 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH17Q12864 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH17Q12864 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH17Q12864 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CDH17Q12864 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CDH17Q12864 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH17Q12864 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH17Q12864 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH17Q12864 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH17Q12864 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH17Q12864 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH17Q12864 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
CDH17Q12864 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH17Q12864 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH17Q12864 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 AC005332.8-201ENST00000622750 2735 ntBASIC18.39■□□□□ 0.53
CDH17Q12864 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDH17Q12864 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms