Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
SUPT4H1P63272 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SUPT4H1P63272 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.03■□□□□ -0
SUPT4H1P63272 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.03■□□□□ -0
SUPT4H1P63272 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.03■□□□□ -0
SUPT4H1P63272 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.03■□□□□ -0
SUPT4H1P63272 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SUPT4H1P63272 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SUPT4H1P63272 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SUPT4H1P63272 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.03■□□□□ -0
SUPT4H1P63272 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.03■□□□□ -0
SUPT4H1P63272 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.03■□□□□ -0
SUPT4H1P63272 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.03■□□□□ -0
SUPT4H1P63272 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SUPT4H1P63272 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.03■□□□□ -0
SUPT4H1P63272 AC098934.4-201ENST00000564127 592 ntBASIC15.03■□□□□ -0
SUPT4H1P63272 CKBP1-201ENST00000565489 1086 ntBASIC15.03■□□□□ -0
SUPT4H1P63272 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.03■□□□□ -0
SUPT4H1P63272 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.03■□□□□ -0
SUPT4H1P63272 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SUPT4H1P63272 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SUPT4H1P63272 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SUPT4H1P63272 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SUPT4H1P63272 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.03■□□□□ -0
SUPT4H1P63272 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SUPT4H1P63272 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.03■□□□□ -0
SUPT4H1P63272 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.03■□□□□ -0
SUPT4H1P63272 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SUPT4H1P63272 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SUPT4H1P63272 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SUPT4H1P63272 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SUPT4H1P63272 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SUPT4H1P63272 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SUPT4H1P63272 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.02■□□□□ -0
SUPT4H1P63272 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SUPT4H1P63272 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.02■□□□□ -0
SUPT4H1P63272 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SUPT4H1P63272 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SUPT4H1P63272 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SUPT4H1P63272 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.02■□□□□ -0
SUPT4H1P63272 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.02■□□□□ -0
SUPT4H1P63272 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SUPT4H1P63272 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.02■□□□□ -0
SUPT4H1P63272 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SUPT4H1P63272 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.02■□□□□ -0
SUPT4H1P63272 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.02■□□□□ -0
SUPT4H1P63272 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.02■□□□□ -0
SUPT4H1P63272 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SUPT4H1P63272 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SUPT4H1P63272 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.02■□□□□ -0
SUPT4H1P63272 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SUPT4H1P63272 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.02■□□□□ -0
SUPT4H1P63272 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.02■□□□□ -0
SUPT4H1P63272 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.02■□□□□ -0
SUPT4H1P63272 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
SUPT4H1P63272 AC008622.2-201ENST00000617006 1229 ntBASIC15.02■□□□□ -0
SUPT4H1P63272 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.02■□□□□ -0
SUPT4H1P63272 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SUPT4H1P63272 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SUPT4H1P63272 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
SUPT4H1P63272 AC133963.1-201ENST00000504166 1679 ntBASIC15.02□□□□□ -0.01
SUPT4H1P63272 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SUPT4H1P63272 UBALD1-205ENST00000590891 2641 ntBASIC15.02□□□□□ -0.01
SUPT4H1P63272 AC034236.2-201ENST00000606662 1610 ntBASIC15.02□□□□□ -0.01
SUPT4H1P63272 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SUPT4H1P63272 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SUPT4H1P63272 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SUPT4H1P63272 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SUPT4H1P63272 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUPT4H1P63272 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUPT4H1P63272 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUPT4H1P63272 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUPT4H1P63272 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUPT4H1P63272 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUPT4H1P63272 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 IKBKGP1-201ENST00000612193 1073 ntBASIC15.01□□□□□ -0.01
SUPT4H1P63272 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUPT4H1P63272 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SUPT4H1P63272 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUPT4H1P63272 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SUPT4H1P63272 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUPT4H1P63272 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SUPT4H1P63272 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SUPT4H1P63272 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15□□□□□ -0.01
SUPT4H1P63272 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms