Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 KLF2P3-201ENST00000451977 1087 ntBASIC20.46■□□□□ 0.87
LBX1P52954 GPR53P-205ENST00000457298 1084 ntBASIC20.46■□□□□ 0.87
LBX1P52954 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.46■□□□□ 0.87
LBX1P52954 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LBX1P52954 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.46■□□□□ 0.87
LBX1P52954 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.46■□□□□ 0.87
LBX1P52954 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.46■□□□□ 0.87
LBX1P52954 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.46■□□□□ 0.87
LBX1P52954 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.46■□□□□ 0.87
LBX1P52954 SPDYE22P-201ENST00000582158 798 ntBASIC20.46■□□□□ 0.87
LBX1P52954 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.46■□□□□ 0.87
LBX1P52954 AC023141.13-201ENST00000604991 943 ntBASIC20.46■□□□□ 0.87
LBX1P52954 AL390754.1-201ENST00000619088 582 ntBASIC20.46■□□□□ 0.87
LBX1P52954 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.46■□□□□ 0.87
LBX1P52954 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.46■□□□□ 0.87
LBX1P52954 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LBX1P52954 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.46■□□□□ 0.87
LBX1P52954 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.46■□□□□ 0.87
LBX1P52954 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.46■□□□□ 0.87
LBX1P52954 FO538757.1-201ENST00000623083 1397 ntBASIC20.46■□□□□ 0.87
LBX1P52954 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.46■□□□□ 0.87
LBX1P52954 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.45■□□□□ 0.86
LBX1P52954 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LBX1P52954 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LBX1P52954 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
LBX1P52954 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LBX1P52954 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LBX1P52954 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LBX1P52954 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LBX1P52954 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LBX1P52954 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LBX1P52954 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.45■□□□□ 0.86
LBX1P52954 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.45■□□□□ 0.86
LBX1P52954 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LBX1P52954 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.45■□□□□ 0.86
LBX1P52954 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.45■□□□□ 0.86
LBX1P52954 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LBX1P52954 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.45■□□□□ 0.86
LBX1P52954 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LBX1P52954 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LBX1P52954 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LBX1P52954 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.44■□□□□ 0.86
LBX1P52954 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.44■□□□□ 0.86
LBX1P52954 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LBX1P52954 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
LBX1P52954 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LBX1P52954 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LBX1P52954 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.44■□□□□ 0.86
LBX1P52954 SPDYE21P-201ENST00000413323 827 ntBASIC20.44■□□□□ 0.86
LBX1P52954 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.44■□□□□ 0.86
LBX1P52954 DDX43P3-201ENST00000441064 443 ntBASIC20.44■□□□□ 0.86
LBX1P52954 TIMM8BP1-201ENST00000452384 211 ntBASIC20.44■□□□□ 0.86
LBX1P52954 AL512638.1-201ENST00000457493 794 ntBASIC20.44■□□□□ 0.86
LBX1P52954 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.44■□□□□ 0.86
LBX1P52954 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.44■□□□□ 0.86
LBX1P52954 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.44■□□□□ 0.86
LBX1P52954 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LBX1P52954 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LBX1P52954 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LBX1P52954 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.44■□□□□ 0.86
LBX1P52954 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LBX1P52954 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LBX1P52954 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LBX1P52954 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LBX1P52954 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.43■□□□□ 0.86
LBX1P52954 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LBX1P52954 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LBX1P52954 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.43■□□□□ 0.86
LBX1P52954 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LBX1P52954 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.43■□□□□ 0.86
LBX1P52954 AC107890.1-201ENST00000422478 521 ntBASIC20.43■□□□□ 0.86
LBX1P52954 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.43■□□□□ 0.86
LBX1P52954 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LBX1P52954 IGHV3-42-201ENST00000520410 361 ntBASIC20.43■□□□□ 0.86
LBX1P52954 AC068137.2-201ENST00000605408 478 ntBASIC20.43■□□□□ 0.86
LBX1P52954 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LBX1P52954 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.43■□□□□ 0.86
LBX1P52954 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LBX1P52954 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.43■□□□□ 0.86
LBX1P52954 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LBX1P52954 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.43■□□□□ 0.86
LBX1P52954 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.43■□□□□ 0.86
LBX1P52954 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.43■□□□□ 0.86
LBX1P52954 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LBX1P52954 LINC00602-201ENST00000629776 2065 ntBASIC20.42■□□□□ 0.86
LBX1P52954 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LBX1P52954 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LBX1P52954 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LBX1P52954 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.42■□□□□ 0.86
LBX1P52954 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.42■□□□□ 0.86
LBX1P52954 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.42■□□□□ 0.86
LBX1P52954 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.42■□□□□ 0.86
LBX1P52954 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.42■□□□□ 0.86
LBX1P52954 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.42■□□□□ 0.86
LBX1P52954 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.42■□□□□ 0.86
LBX1P52954 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
LBX1P52954 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.42■□□□□ 0.86
LBX1P52954 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.42■□□□□ 0.86
LBX1P52954 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
LBX1P52954 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms