Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HTR1AP08908 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 KRT8P41-201ENST00000533985 1514 ntBASIC16.65■□□□□ 0.26
HTR1AP08908 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
HTR1AP08908 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR1AP08908 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
HTR1AP08908 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR1AP08908 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR1AP08908 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.65■□□□□ 0.26
HTR1AP08908 AL160286.2-201ENST00000567150 934 ntBASIC16.65■□□□□ 0.26
HTR1AP08908 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.65■□□□□ 0.26
HTR1AP08908 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.65■□□□□ 0.26
HTR1AP08908 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HTR1AP08908 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR1AP08908 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR1AP08908 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 AC011270.2-201ENST00000624293 2550 ntBASIC16.65■□□□□ 0.26
HTR1AP08908 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.65■□□□□ 0.26
HTR1AP08908 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HTR1AP08908 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
HTR1AP08908 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.64■□□□□ 0.26
HTR1AP08908 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
HTR1AP08908 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.64■□□□□ 0.26
HTR1AP08908 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.64■□□□□ 0.25
HTR1AP08908 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.64■□□□□ 0.25
HTR1AP08908 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.64■□□□□ 0.25
HTR1AP08908 GUSBP6-202ENST00000438529 1198 ntBASIC16.64■□□□□ 0.25
HTR1AP08908 TSPY6P-201ENST00000448518 926 ntBASIC16.64■□□□□ 0.25
HTR1AP08908 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.64■□□□□ 0.25
HTR1AP08908 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.64■□□□□ 0.25
HTR1AP08908 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.64■□□□□ 0.25
HTR1AP08908 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.64■□□□□ 0.25
HTR1AP08908 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.64■□□□□ 0.25
HTR1AP08908 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HTR1AP08908 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.64■□□□□ 0.25
HTR1AP08908 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HTR1AP08908 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HTR1AP08908 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HTR1AP08908 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HTR1AP08908 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.64■□□□□ 0.25
HTR1AP08908 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
HTR1AP08908 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTR1AP08908 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HTR1AP08908 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTR1AP08908 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTR1AP08908 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTR1AP08908 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTR1AP08908 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
HTR1AP08908 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HTR1AP08908 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HTR1AP08908 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.63■□□□□ 0.25
HTR1AP08908 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HTR1AP08908 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HTR1AP08908 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.63■□□□□ 0.25
HTR1AP08908 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.63■□□□□ 0.25
HTR1AP08908 PRKY-204ENST00000533551 1019 ntBASIC16.63■□□□□ 0.25
HTR1AP08908 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.63■□□□□ 0.25
HTR1AP08908 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
HTR1AP08908 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
HTR1AP08908 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms