Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.63■□□□□ 0.25
P04436 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.63■□□□□ 0.25
P04436 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04436 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04436 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P04436 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04436 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04436 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P04436 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04436 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04436 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
P04436 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.63■□□□□ 0.25
P04436 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.62■□□□□ 0.25
P04436 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.62■□□□□ 0.25
P04436 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
P04436 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.62■□□□□ 0.25
P04436 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.62■□□□□ 0.25
P04436 TSPY12P-201ENST00000421279 868 ntBASIC16.62■□□□□ 0.25
P04436 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.62■□□□□ 0.25
P04436 TOB2P1-201ENST00000469761 992 ntBASIC16.62■□□□□ 0.25
P04436 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.62■□□□□ 0.25
P04436 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.62■□□□□ 0.25
P04436 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.62■□□□□ 0.25
P04436 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.62■□□□□ 0.25
P04436 TPSP2-201ENST00000561760 610 ntBASIC16.62■□□□□ 0.25
P04436 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
P04436 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.62■□□□□ 0.25
P04436 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
P04436 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.62■□□□□ 0.25
P04436 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
P04436 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.62■□□□□ 0.25
P04436 OR6D1P-202ENST00000641007 5290 ntBASIC16.62■□□□□ 0.25
P04436 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.62■□□□□ 0.25
P04436 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
P04436 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
P04436 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.62■□□□□ 0.25
P04436 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04436 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.61■□□□□ 0.25
P04436 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
P04436 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.61■□□□□ 0.25
P04436 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
P04436 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
P04436 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.61■□□□□ 0.25
P04436 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
P04436 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.61■□□□□ 0.25
P04436 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.61■□□□□ 0.25
P04436 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.61■□□□□ 0.25
P04436 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.61■□□□□ 0.25
P04436 AC011840.4-201ENST00000578471 627 ntBASIC16.61■□□□□ 0.25
P04436 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.61■□□□□ 0.25
P04436 Z69720.1-201ENST00000601483 472 ntBASIC16.61■□□□□ 0.25
P04436 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.61■□□□□ 0.25
P04436 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
P04436 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.61■□□□□ 0.25
P04436 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04436 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
P04436 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 LINC01126-201ENST00000623515 1646 ntBASIC16.6■□□□□ 0.25
P04436 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.6■□□□□ 0.25
P04436 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04436 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms