Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
PAX4O43316 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PAX4O43316 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.03□□□□□ -0.32
PAX4O43316 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.03□□□□□ -0.32
PAX4O43316 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 MYLKP1-201ENST00000509077 1580 ntBASIC13.03□□□□□ -0.32
PAX4O43316 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PAX4O43316 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
PAX4O43316 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
PAX4O43316 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PAX4O43316 AC005082.1-201ENST00000413042 2259 ntBASIC13.02□□□□□ -0.32
PAX4O43316 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
PAX4O43316 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
PAX4O43316 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.02□□□□□ -0.32
PAX4O43316 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
PAX4O43316 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
PAX4O43316 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.02□□□□□ -0.32
PAX4O43316 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.02□□□□□ -0.32
PAX4O43316 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.02□□□□□ -0.32
PAX4O43316 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
PAX4O43316 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.02□□□□□ -0.33
PAX4O43316 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
PAX4O43316 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.02□□□□□ -0.33
PAX4O43316 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.02□□□□□ -0.33
PAX4O43316 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.02□□□□□ -0.33
PAX4O43316 KRT18P41-201ENST00000518924 1277 ntBASIC13.02□□□□□ -0.33
PAX4O43316 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.02□□□□□ -0.33
PAX4O43316 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.02□□□□□ -0.33
PAX4O43316 AC140113.3-201ENST00000605663 199 ntBASIC13.02□□□□□ -0.33
PAX4O43316 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.02□□□□□ -0.33
PAX4O43316 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
PAX4O43316 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
PAX4O43316 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.02□□□□□ -0.33
PAX4O43316 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PAX4O43316 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.01□□□□□ -0.33
PAX4O43316 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 AL499627.1-201ENST00000569373 2188 ntBASIC13.01□□□□□ -0.33
PAX4O43316 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.01□□□□□ -0.33
PAX4O43316 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
PAX4O43316 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
PAX4O43316 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
PAX4O43316 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.01□□□□□ -0.33
PAX4O43316 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.01□□□□□ -0.33
PAX4O43316 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.01□□□□□ -0.33
PAX4O43316 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.01□□□□□ -0.33
PAX4O43316 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.01□□□□□ -0.33
PAX4O43316 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.01□□□□□ -0.33
PAX4O43316 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
PAX4O43316 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
PAX4O43316 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
PAX4O43316 AC097493.4-201ENST00000641197 219 ntBASIC13.01□□□□□ -0.33
PAX4O43316 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PAX4O43316 HOXB1-202ENST00000577092 1414 ntBASIC13.01□□□□□ -0.33
PAX4O43316 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms