Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HDAC3O15379 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 AC099398.1-201ENST00000567919 2776 ntBASIC17.75■□□□□ 0.43
HDAC3O15379 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HDAC3O15379 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HDAC3O15379 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.75■□□□□ 0.43
HDAC3O15379 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
HDAC3O15379 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
HDAC3O15379 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.75■□□□□ 0.43
HDAC3O15379 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.75■□□□□ 0.43
HDAC3O15379 AC073195.1-201ENST00000607241 877 ntBASIC17.75■□□□□ 0.43
HDAC3O15379 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.75■□□□□ 0.43
HDAC3O15379 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.75■□□□□ 0.43
HDAC3O15379 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.75■□□□□ 0.43
HDAC3O15379 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC3O15379 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC3O15379 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC3O15379 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HDAC3O15379 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC3O15379 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.74■□□□□ 0.43
HDAC3O15379 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC3O15379 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.74■□□□□ 0.43
HDAC3O15379 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC3O15379 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC3O15379 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC3O15379 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.74■□□□□ 0.43
HDAC3O15379 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
HDAC3O15379 ESRRAP1-201ENST00000400596 1257 ntBASIC17.74■□□□□ 0.43
HDAC3O15379 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.74■□□□□ 0.43
HDAC3O15379 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HDAC3O15379 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.74■□□□□ 0.43
HDAC3O15379 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.74■□□□□ 0.43
HDAC3O15379 AF186192.3-201ENST00000583427 947 ntBASIC17.74■□□□□ 0.43
HDAC3O15379 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC3O15379 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
HDAC3O15379 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.74■□□□□ 0.43
HDAC3O15379 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HDAC3O15379 FSCN1P1-201ENST00000568912 1481 ntBASIC17.74■□□□□ 0.43
HDAC3O15379 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC3O15379 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC3O15379 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC3O15379 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC3O15379 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.73■□□□□ 0.43
HDAC3O15379 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.73■□□□□ 0.43
HDAC3O15379 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 AL023806.1-201ENST00000603994 1649 ntBASIC17.73■□□□□ 0.43
HDAC3O15379 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.73■□□□□ 0.43
HDAC3O15379 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.73■□□□□ 0.43
HDAC3O15379 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.73■□□□□ 0.43
HDAC3O15379 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
HDAC3O15379 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HDAC3O15379 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.73■□□□□ 0.43
HDAC3O15379 MIR3180-5-201ENST00000583743 153 ntBASIC17.73■□□□□ 0.43
HDAC3O15379 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 AC096733.2-201ENST00000609937 1394 ntBASIC17.73■□□□□ 0.43
HDAC3O15379 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HDAC3O15379 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HDAC3O15379 AC036111.1-201ENST00000533973 1582 ntBASIC17.73■□□□□ 0.43
HDAC3O15379 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HDAC3O15379 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.73■□□□□ 0.43
HDAC3O15379 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC3O15379 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.72■□□□□ 0.43
HDAC3O15379 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HDAC3O15379 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HDAC3O15379 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HDAC3O15379 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
HDAC3O15379 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC3O15379 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC3O15379 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms