Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.46■□□□□ 0.71
SPTLC1O15269 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC1O15269 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC1O15269 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC1O15269 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.46■□□□□ 0.71
SPTLC1O15269 MIR3652-201ENST00000579335 131 ntBASIC19.46■□□□□ 0.71
SPTLC1O15269 AP005901.3-202ENST00000581653 237 ntBASIC19.46■□□□□ 0.71
SPTLC1O15269 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SPTLC1O15269 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.46■□□□□ 0.71
SPTLC1O15269 AC006538.3-201ENST00000612495 578 ntBASIC19.46■□□□□ 0.71
SPTLC1O15269 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SPTLC1O15269 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.46■□□□□ 0.71
SPTLC1O15269 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC1O15269 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
SPTLC1O15269 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SPTLC1O15269 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC1O15269 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.46■□□□□ 0.71
SPTLC1O15269 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
SPTLC1O15269 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SPTLC1O15269 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC1O15269 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC1O15269 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC1O15269 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
SPTLC1O15269 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.45■□□□□ 0.7
SPTLC1O15269 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 GMCL1P1-201ENST00000463439 1581 ntBASIC19.45■□□□□ 0.7
SPTLC1O15269 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 LINC00167-201ENST00000530583 1419 ntBASIC19.45■□□□□ 0.7
SPTLC1O15269 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.45■□□□□ 0.7
SPTLC1O15269 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 KRT17P6-201ENST00000453795 1220 ntBASIC19.45■□□□□ 0.7
SPTLC1O15269 GUSBP12-201ENST00000513727 720 ntBASIC19.45■□□□□ 0.7
SPTLC1O15269 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.45■□□□□ 0.7
SPTLC1O15269 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.45■□□□□ 0.7
SPTLC1O15269 AP000867.3-201ENST00000524675 377 ntBASIC19.45■□□□□ 0.7
SPTLC1O15269 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.45■□□□□ 0.7
SPTLC1O15269 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 AC023511.2-201ENST00000618803 211 ntBASIC19.45■□□□□ 0.7
SPTLC1O15269 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 AL138781.2-201ENST00000617896 1843 ntBASIC19.45■□□□□ 0.7
SPTLC1O15269 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC1O15269 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.44■□□□□ 0.7
SPTLC1O15269 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SPTLC1O15269 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SPTLC1O15269 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.44■□□□□ 0.7
SPTLC1O15269 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
SPTLC1O15269 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.44■□□□□ 0.7
SPTLC1O15269 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.44■□□□□ 0.7
SPTLC1O15269 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.44■□□□□ 0.7
SPTLC1O15269 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.44■□□□□ 0.7
SPTLC1O15269 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
SPTLC1O15269 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.44■□□□□ 0.7
SPTLC1O15269 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.44■□□□□ 0.7
SPTLC1O15269 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.44■□□□□ 0.7
SPTLC1O15269 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SPTLC1O15269 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SPTLC1O15269 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SPTLC1O15269 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC1O15269 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.44■□□□□ 0.7
SPTLC1O15269 AC233702.3-201ENST00000578656 1387 ntBASIC19.44■□□□□ 0.7
SPTLC1O15269 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SPTLC1O15269 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SPTLC1O15269 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SPTLC1O15269 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC1O15269 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.43■□□□□ 0.7
SPTLC1O15269 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms