Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MEIS3P1A6NDR6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 SLC29A4P1-201ENST00000398760 971 ntBASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 Z85996.1-201ENST00000494644 937 ntBASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 IKBKGP1-201ENST00000612193 1073 ntBASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 AC092437.1-201ENST00000624794 1048 ntBASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MEIS3P1A6NDR6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
MEIS3P1A6NDR6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
MEIS3P1A6NDR6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 AC011676.5-201ENST00000624864 2660 ntBASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MEIS3P1A6NDR6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms