Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AP005242.2-201ENST00000580065 1175 ntBASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 AL023803.3-201ENST00000615559 522 ntBASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 AC012313.1-201ENST00000593393 3059 ntBASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 AC108860.2-201ENST00000562760 2183 ntBASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 HTR7P1-202ENST00000624664 4411 ntBASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 TSPY20P-201ENST00000450910 630 ntBASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 AC098590.1-201ENST00000468126 897 ntBASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 AP003041.3-201ENST00000527151 707 ntBASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 AC233702.5-201ENST00000584107 538 ntBASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 CR769767.2-201ENST00000622735 460 ntBASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 AL049637.2-201ENST00000641778 930 ntBASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 HCG11-201ENST00000411553 5696 ntBASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 SIRPAP1-201ENST00000448467 1770 ntBASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
TCRBV9S1A1TA0A576 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 AC142381.4-202ENST00000563973 229 ntBASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 WWOX-216ENST00000569818 525 ntBASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 AP001412.1-201ENST00000608405 714 ntBASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 AL024508.2-201ENST00000607749 1894 ntBASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.34■□□□□ 0.53
TCRBV9S1A1TA0A576 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV9S1A1TA0A576 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV9S1A1TA0A576 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.33■□□□□ 0.53
TCRBV9S1A1TA0A576 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV9S1A1TA0A576 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV9S1A1TA0A576 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV9S1A1TA0A576 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.33■□□□□ 0.53
TCRBV9S1A1TA0A576 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV9S1A1TA0A576 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.33■□□□□ 0.53
TCRBV9S1A1TA0A576 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV9S1A1TA0A576 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms