Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX11Q9Y5W9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX11Q9Y5W9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX11Q9Y5W9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX11Q9Y5W9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX11Q9Y5W9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.06■□□□□ 0.48
SNX11Q9Y5W9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX11Q9Y5W9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX11Q9Y5W9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNX11Q9Y5W9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX11Q9Y5W9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 POM121L3P-201ENST00000419331 1163 ntBASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 AL671883.3-201ENST00000603274 991 ntBASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 AC064862.7-201ENST00000604520 867 ntBASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX11Q9Y5W9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 AP001005.1-201ENST00000571755 1248 ntBASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 HEIH-201ENST00000623091 1652 ntBASIC18.03■□□□□ 0.48
SNX11Q9Y5W9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms