Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ZFYVE28Q9HCC9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ZFYVE28Q9HCC9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 SDHAP2-201ENST00000455183 2001 ntBASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 AC097374.2-201ENST00000618617 1306 ntBASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFYVE28Q9HCC9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 AC006557.2-201ENST00000592985 1240 ntBASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 AL022326.1-202ENST00000641533 845 ntBASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZFYVE28Q9HCC9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 AC254562.1-201ENST00000417586 456 ntBASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 HTR5BP-201ENST00000430851 1154 ntBASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 BX005266.1-201ENST00000473402 457 ntBASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 AC108751.1-201ENST00000490852 363 ntBASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 YBX1P5-201ENST00000509441 847 ntBASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZFYVE28Q9HCC9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 KRT18P27-201ENST00000427733 1299 ntBASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 MIR4469-201ENST00000583919 79 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms