Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
LIMD2Q9BT23 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
LIMD2Q9BT23 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
LIMD2Q9BT23 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
LIMD2Q9BT23 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.67
LIMD2Q9BT23 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LIMD2Q9BT23 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 AC006333.2-201ENST00000607957 2099 ntBASIC10.89□□□□□ -0.67
LIMD2Q9BT23 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 MIR718-201ENST00000390190 70 ntBASIC10.89□□□□□ -0.67
LIMD2Q9BT23 FDX2-207ENST00000494368 584 ntTSL 4 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 AC142381.4-202ENST00000563973 229 ntBASIC10.89□□□□□ -0.67
LIMD2Q9BT23 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 CYGB-204ENST00000589342 815 ntTSL 3 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 COMP-202ENST00000425807 2292 ntTSL 2 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LIMD2Q9BT23 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 BAALC-201ENST00000297574 801 ntTSL 3 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 STK24-203ENST00000397517 4578 ntTSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 KRT8P11-201ENST00000409686 1436 ntBASIC10.88□□□□□ -0.67
LIMD2Q9BT23 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 RPS2P4-201ENST00000476944 856 ntBASIC10.88□□□□□ -0.67
LIMD2Q9BT23 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 GRAMD4P8-201ENST00000605465 1115 ntBASIC10.88□□□□□ -0.67
LIMD2Q9BT23 MIR6786-201ENST00000616843 113 ntBASIC10.88□□□□□ -0.67
LIMD2Q9BT23 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms