Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.98■□□□□ 0.63
CDX2Q99626 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.98■□□□□ 0.63
CDX2Q99626 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.98■□□□□ 0.63
CDX2Q99626 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.98■□□□□ 0.63
CDX2Q99626 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDX2Q99626 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CDX2Q99626 AC022145.2-201ENST00000598203 171 ntBASIC18.98■□□□□ 0.63
CDX2Q99626 AC008667.4-201ENST00000607370 168 ntBASIC18.98■□□□□ 0.63
CDX2Q99626 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDX2Q99626 AC010507.1-201ENST00000633895 436 ntBASIC18.98■□□□□ 0.63
CDX2Q99626 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDX2Q99626 AC092902.6-201ENST00000641783 218 ntBASIC18.98■□□□□ 0.63
CDX2Q99626 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDX2Q99626 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.98■□□□□ 0.63
CDX2Q99626 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.98■□□□□ 0.63
CDX2Q99626 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDX2Q99626 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDX2Q99626 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDX2Q99626 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.97■□□□□ 0.63
CDX2Q99626 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDX2Q99626 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.97■□□□□ 0.63
CDX2Q99626 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDX2Q99626 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDX2Q99626 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.97■□□□□ 0.63
CDX2Q99626 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDX2Q99626 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CDX2Q99626 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.97■□□□□ 0.63
CDX2Q99626 AC055876.3-201ENST00000431496 288 ntBASIC18.97■□□□□ 0.63
CDX2Q99626 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.97■□□□□ 0.63
CDX2Q99626 AC096734.2-201ENST00000562054 433 ntBASIC18.97■□□□□ 0.63
CDX2Q99626 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.97■□□□□ 0.63
CDX2Q99626 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDX2Q99626 AC138649.4-201ENST00000612222 287 ntBASIC18.97■□□□□ 0.63
CDX2Q99626 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.97■□□□□ 0.63
CDX2Q99626 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDX2Q99626 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDX2Q99626 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDX2Q99626 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.97■□□□□ 0.63
CDX2Q99626 FEM1AP3-201ENST00000403722 1741 ntBASIC18.97■□□□□ 0.63
CDX2Q99626 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.96■□□□□ 0.63
CDX2Q99626 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDX2Q99626 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDX2Q99626 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CDX2Q99626 MIR149-201ENST00000384879 89 ntBASIC18.96■□□□□ 0.63
CDX2Q99626 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.96■□□□□ 0.63
CDX2Q99626 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDX2Q99626 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDX2Q99626 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.96■□□□□ 0.63
CDX2Q99626 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.96■□□□□ 0.63
CDX2Q99626 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.96■□□□□ 0.63
CDX2Q99626 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDX2Q99626 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDX2Q99626 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDX2Q99626 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDX2Q99626 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.96■□□□□ 0.63
CDX2Q99626 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDX2Q99626 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDX2Q99626 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDX2Q99626 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDX2Q99626 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDX2Q99626 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDX2Q99626 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDX2Q99626 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDX2Q99626 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CDX2Q99626 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.95■□□□□ 0.62
CDX2Q99626 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.95■□□□□ 0.62
CDX2Q99626 UGT1A2P-201ENST00000454886 866 ntBASIC18.95■□□□□ 0.62
CDX2Q99626 RPS15P9-201ENST00000494093 319 ntBASIC18.95■□□□□ 0.62
CDX2Q99626 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDX2Q99626 CR383656.12-201ENST00000549567 513 ntBASIC18.95■□□□□ 0.62
CDX2Q99626 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.95■□□□□ 0.62
CDX2Q99626 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.95■□□□□ 0.62
CDX2Q99626 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.95■□□□□ 0.62
CDX2Q99626 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.95■□□□□ 0.62
CDX2Q99626 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDX2Q99626 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDX2Q99626 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CDX2Q99626 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.95■□□□□ 0.62
CDX2Q99626 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDX2Q99626 LINC00602-201ENST00000629776 2065 ntBASIC18.94■□□□□ 0.62
CDX2Q99626 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDX2Q99626 SIGLEC16-201ENST00000599858 1437 ntBASIC18.94■□□□□ 0.62
CDX2Q99626 AC025580.3-201ENST00000617932 1424 ntBASIC18.94■□□□□ 0.62
CDX2Q99626 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.94■□□□□ 0.62
CDX2Q99626 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDX2Q99626 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.94■□□□□ 0.62
CDX2Q99626 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CDX2Q99626 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.94■□□□□ 0.62
CDX2Q99626 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.94■□□□□ 0.62
CDX2Q99626 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDX2Q99626 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.94■□□□□ 0.62
CDX2Q99626 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.94■□□□□ 0.62
CDX2Q99626 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDX2Q99626 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDX2Q99626 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.94■□□□□ 0.62
CDX2Q99626 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDX2Q99626 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.94■□□□□ 0.62
CDX2Q99626 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDX2Q99626 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.94■□□□□ 0.62
CDX2Q99626 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms