Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 NEK4P2-201ENST00000580004 1012 ntBASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 OR6D1P-202ENST00000641007 5290 ntBASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD1Q96RS6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 AC067852.2-201ENST00000590513 2313 ntBASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 RCN1P1-201ENST00000400413 996 ntBASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 AC092865.7-201ENST00000641832 219 ntBASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD1Q96RS6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 KRT18P57-201ENST00000443599 1254 ntBASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 KRT18P41-201ENST00000518924 1277 ntBASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 ANO7L1-203ENST00000602586 1720 ntBASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
NUDCD1Q96RS6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 KRT8P7-201ENST00000533003 1432 ntBASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 HOXB1-202ENST00000577092 1414 ntBASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 AP000523.1-201ENST00000398242 1049 ntBASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 BX664615.1-201ENST00000443558 458 ntBASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.86■□□□□ 0.61
NUDCD1Q96RS6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms