Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 AL590627.1-203ENST00000421194 1026 ntBASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 AP001005.1-201ENST00000571755 1248 ntBASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYNGAP1Q96PV0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 AC096582.2-201ENST00000510860 516 ntBASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 AL671883.3-201ENST00000603274 991 ntBASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNGAP1Q96PV0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 AC009102.3-201ENST00000623118 1491 ntBASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SYNGAP1Q96PV0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 KRT18P67-201ENST00000432816 1264 ntBASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 FAM197Y8-203ENST00000450145 560 ntBASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.67■□□□□ 0.9
SYNGAP1Q96PV0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYNGAP1Q96PV0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms