Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 TSPY21P-201ENST00000433481 731 ntBASIC16.26■□□□□ 0.19
LRRC28Q86X40 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 BX088651.1-201ENST00000540551 451 ntBASIC16.26■□□□□ 0.19
LRRC28Q86X40 AC026271.3-201ENST00000571884 352 ntBASIC16.26■□□□□ 0.19
LRRC28Q86X40 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 REXO1L10P-201ENST00000615707 1290 ntBASIC16.26■□□□□ 0.19
LRRC28Q86X40 REXO1L12P-201ENST00000622156 912 ntBASIC16.26■□□□□ 0.19
LRRC28Q86X40 AC073912.3-201ENST00000624414 853 ntBASIC16.26■□□□□ 0.19
LRRC28Q86X40 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 PKD1P1-201ENST00000458669 6805 ntBASIC16.26■□□□□ 0.19
LRRC28Q86X40 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC28Q86X40 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 AL499627.1-201ENST00000569373 2188 ntBASIC16.26■□□□□ 0.19
LRRC28Q86X40 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC28Q86X40 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC28Q86X40 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC28Q86X40 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 AC004980.1-204ENST00000429707 299 ntBASIC16.25■□□□□ 0.19
LRRC28Q86X40 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC28Q86X40 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC28Q86X40 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC28Q86X40 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC28Q86X40 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC28Q86X40 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC28Q86X40 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LRRC28Q86X40 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LRRC28Q86X40 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
LRRC28Q86X40 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 FSCN1P1-201ENST00000568912 1481 ntBASIC16.24■□□□□ 0.19
LRRC28Q86X40 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LRRC28Q86X40 TSPY15P-201ENST00000457163 923 ntBASIC16.24■□□□□ 0.19
LRRC28Q86X40 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC28Q86X40 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LRRC28Q86X40 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC28Q86X40 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRC28Q86X40 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRC28Q86X40 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRC28Q86X40 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRC28Q86X40 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 AC080080.1-201ENST00000625121 2420 ntBASIC16.24■□□□□ 0.19
LRRC28Q86X40 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LRRC28Q86X40 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC28Q86X40 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRRC28Q86X40 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC28Q86X40 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms