Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
COBLL1Q53SF7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COBLL1Q53SF7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COBLL1Q53SF7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COBLL1Q53SF7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COBLL1Q53SF7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COBLL1Q53SF7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COBLL1Q53SF7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COBLL1Q53SF7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COBLL1Q53SF7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
COBLL1Q53SF7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.03■□□□□ 0.8
COBLL1Q53SF7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COBLL1Q53SF7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
COBLL1Q53SF7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COBLL1Q53SF7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 KRT89P-201ENST00000620027 1478 ntBASIC20.01■□□□□ 0.79
COBLL1Q53SF7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COBLL1Q53SF7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COBLL1Q53SF7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20■□□□□ 0.79
COBLL1Q53SF7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COBLL1Q53SF7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20■□□□□ 0.79
COBLL1Q53SF7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
COBLL1Q53SF7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20■□□□□ 0.79
COBLL1Q53SF7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20■□□□□ 0.79
COBLL1Q53SF7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20■□□□□ 0.79
COBLL1Q53SF7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COBLL1Q53SF7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COBLL1Q53SF7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20■□□□□ 0.79
COBLL1Q53SF7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20■□□□□ 0.79
COBLL1Q53SF7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20■□□□□ 0.79
COBLL1Q53SF7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20■□□□□ 0.79
COBLL1Q53SF7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20■□□□□ 0.79
COBLL1Q53SF7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
COBLL1Q53SF7 SLC25A3P1-201ENST00000443844 931 ntBASIC20■□□□□ 0.79
COBLL1Q53SF7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COBLL1Q53SF7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COBLL1Q53SF7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20■□□□□ 0.79
COBLL1Q53SF7 AC012306.2-201ENST00000609350 630 ntBASIC20■□□□□ 0.79
COBLL1Q53SF7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20■□□□□ 0.79
COBLL1Q53SF7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COBLL1Q53SF7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20■□□□□ 0.79
COBLL1Q53SF7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COBLL1Q53SF7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COBLL1Q53SF7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20■□□□□ 0.79
COBLL1Q53SF7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
COBLL1Q53SF7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COBLL1Q53SF7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COBLL1Q53SF7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COBLL1Q53SF7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
COBLL1Q53SF7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.99■□□□□ 0.79
COBLL1Q53SF7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COBLL1Q53SF7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.99■□□□□ 0.79
COBLL1Q53SF7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms