Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGA2P52926 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGA2P52926 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGA2P52926 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
HMGA2P52926 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HMGA2P52926 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HMGA2P52926 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HMGA2P52926 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
HMGA2P52926 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HMGA2P52926 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 FAM197Y1-201ENST00000421178 764 ntBASIC16.66■□□□□ 0.26
HMGA2P52926 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGA2P52926 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.66■□□□□ 0.26
HMGA2P52926 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGA2P52926 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.66■□□□□ 0.26
HMGA2P52926 AL138688.1-201ENST00000624851 1594 ntBASIC16.66■□□□□ 0.26
HMGA2P52926 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGA2P52926 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGA2P52926 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGA2P52926 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGA2P52926 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 AL024508.2-201ENST00000607749 1894 ntBASIC16.65■□□□□ 0.26
HMGA2P52926 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 AL135905.2-201ENST00000584934 1404 ntBASIC16.65■□□□□ 0.26
HMGA2P52926 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HMGA2P52926 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HMGA2P52926 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGA2P52926 AC097488.1-201ENST00000507834 756 ntBASIC16.65■□□□□ 0.26
HMGA2P52926 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGA2P52926 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.65■□□□□ 0.26
HMGA2P52926 CD177P1-201ENST00000606252 935 ntBASIC16.65■□□□□ 0.26
HMGA2P52926 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 AP001094.4-201ENST00000579008 2176 ntBASIC16.65■□□□□ 0.26
HMGA2P52926 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.65■□□□□ 0.26
HMGA2P52926 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HMGA2P52926 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGA2P52926 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.65■□□□□ 0.26
HMGA2P52926 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 AL355312.1-201ENST00000407115 2176 ntBASIC16.64■□□□□ 0.25
HMGA2P52926 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HMGA2P52926 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HMGA2P52926 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 KRT18P23-201ENST00000435622 1283 ntBASIC16.64■□□□□ 0.25
HMGA2P52926 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGA2P52926 AC009065.1-201ENST00000564055 1225 ntBASIC16.64■□□□□ 0.25
HMGA2P52926 WWOX-216ENST00000569818 525 ntBASIC16.64■□□□□ 0.25
HMGA2P52926 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGA2P52926 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HMGA2P52926 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 AC133963.1-201ENST00000504166 1679 ntBASIC16.64■□□□□ 0.25
HMGA2P52926 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 LINC00602-201ENST00000629776 2065 ntBASIC16.64■□□□□ 0.25
HMGA2P52926 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGA2P52926 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HMGA2P52926 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms