Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF140P52738 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF140P52738 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF140P52738 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF140P52738 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF140P52738 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF140P52738 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF140P52738 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ZNF140P52738 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF140P52738 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF140P52738 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF140P52738 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF140P52738 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF140P52738 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF140P52738 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.16■□□□□ 0.5
ZNF140P52738 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF140P52738 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF140P52738 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.16■□□□□ 0.5
ZNF140P52738 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.16■□□□□ 0.5
ZNF140P52738 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ZNF140P52738 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF140P52738 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF140P52738 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF140P52738 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF140P52738 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF140P52738 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ZNF140P52738 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ZNF140P52738 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ZNF140P52738 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF140P52738 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF140P52738 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.15■□□□□ 0.5
ZNF140P52738 AC113404.2-201ENST00000507884 177 ntBASIC18.15■□□□□ 0.5
ZNF140P52738 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.15■□□□□ 0.5
ZNF140P52738 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.15■□□□□ 0.5
ZNF140P52738 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.15■□□□□ 0.5
ZNF140P52738 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.15■□□□□ 0.5
ZNF140P52738 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF140P52738 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF140P52738 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZNF140P52738 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ZNF140P52738 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZNF140P52738 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.14■□□□□ 0.5
ZNF140P52738 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZNF140P52738 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
ZNF140P52738 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZNF140P52738 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF140P52738 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF140P52738 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF140P52738 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF140P52738 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF140P52738 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
ZNF140P52738 VENTXP5-201ENST00000523979 775 ntBASIC18.14■□□□□ 0.49
ZNF140P52738 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.14■□□□□ 0.49
ZNF140P52738 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF140P52738 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF140P52738 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF140P52738 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ZNF140P52738 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
ZNF140P52738 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ZNF140P52738 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF140P52738 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF140P52738 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF140P52738 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
ZNF140P52738 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF140P52738 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ZNF140P52738 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF140P52738 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF140P52738 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.14■□□□□ 0.49
ZNF140P52738 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ZNF140P52738 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
ZNF140P52738 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF140P52738 AP000997.3-201ENST00000623333 2250 ntBASIC18.14■□□□□ 0.49
ZNF140P52738 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF140P52738 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF140P52738 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
ZNF140P52738 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF140P52738 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms