Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.87■□□□□ 0.77
RFX1P22670 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RFX1P22670 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.87■□□□□ 0.77
RFX1P22670 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX1P22670 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 AL163051.1-201ENST00000569214 1512 ntBASIC19.86■□□□□ 0.77
RFX1P22670 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.86■□□□□ 0.77
RFX1P22670 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.86■□□□□ 0.77
RFX1P22670 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RFX1P22670 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.86■□□□□ 0.77
RFX1P22670 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 MIR3180-4-201ENST00000582223 153 ntBASIC19.86■□□□□ 0.77
RFX1P22670 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.86■□□□□ 0.77
RFX1P22670 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.86■□□□□ 0.77
RFX1P22670 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RFX1P22670 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 GMCL1P1-201ENST00000463439 1581 ntBASIC19.86■□□□□ 0.77
RFX1P22670 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RFX1P22670 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX1P22670 AC009102.3-201ENST00000623118 1491 ntBASIC19.86■□□□□ 0.77
RFX1P22670 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.86■□□□□ 0.77
RFX1P22670 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RFX1P22670 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.85■□□□□ 0.77
RFX1P22670 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX1P22670 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RFX1P22670 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.85■□□□□ 0.77
RFX1P22670 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX1P22670 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFX1P22670 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFX1P22670 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RFX1P22670 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX1P22670 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX1P22670 KRT18P23-201ENST00000435622 1283 ntBASIC19.85■□□□□ 0.77
RFX1P22670 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX1P22670 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.85■□□□□ 0.77
RFX1P22670 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.85■□□□□ 0.77
RFX1P22670 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.85■□□□□ 0.77
RFX1P22670 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.85■□□□□ 0.77
RFX1P22670 AC012313.10-201ENST00000623509 926 ntBASIC19.85■□□□□ 0.77
RFX1P22670 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RFX1P22670 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.85■□□□□ 0.77
RFX1P22670 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RFX1P22670 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX1P22670 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFX1P22670 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFX1P22670 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFX1P22670 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFX1P22670 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.85■□□□□ 0.77
RFX1P22670 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.84■□□□□ 0.77
RFX1P22670 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.84■□□□□ 0.77
RFX1P22670 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.84■□□□□ 0.77
RFX1P22670 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RFX1P22670 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RFX1P22670 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.84■□□□□ 0.77
RFX1P22670 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX1P22670 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFX1P22670 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RFX1P22670 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFX1P22670 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.84■□□□□ 0.77
RFX1P22670 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.84■□□□□ 0.77
RFX1P22670 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.84■□□□□ 0.77
RFX1P22670 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.84■□□□□ 0.77
RFX1P22670 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX1P22670 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX1P22670 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RFX1P22670 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFX1P22670 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFX1P22670 NOC2LP2-201ENST00000407594 1944 ntBASIC19.84■□□□□ 0.77
RFX1P22670 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.84■□□□□ 0.77
RFX1P22670 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX1P22670 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.84■□□□□ 0.77
RFX1P22670 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RFX1P22670 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
RFX1P22670 ESPNP-201ENST00000270691 2015 ntBASIC19.83■□□□□ 0.77
RFX1P22670 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms