Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPRP12270 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPRP12270 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPRP12270 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.06■□□□□ 0.32
TPRP12270 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.06■□□□□ 0.32
TPRP12270 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPRP12270 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TPRP12270 AC004817.3-201ENST00000602957 2129 ntBASIC17.06■□□□□ 0.32
TPRP12270 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TPRP12270 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPRP12270 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPRP12270 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TPRP12270 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPRP12270 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.06■□□□□ 0.32
TPRP12270 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPRP12270 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPRP12270 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.06■□□□□ 0.32
TPRP12270 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.06■□□□□ 0.32
TPRP12270 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.06■□□□□ 0.32
TPRP12270 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.06■□□□□ 0.32
TPRP12270 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
TPRP12270 AL391422.3-201ENST00000603791 2761 ntBASIC17.05■□□□□ 0.32
TPRP12270 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.05■□□□□ 0.32
TPRP12270 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPRP12270 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TPRP12270 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPRP12270 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPRP12270 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPRP12270 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPRP12270 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.05■□□□□ 0.32
TPRP12270 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TPRP12270 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.05■□□□□ 0.32
TPRP12270 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.05■□□□□ 0.32
TPRP12270 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPRP12270 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPRP12270 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.05■□□□□ 0.32
TPRP12270 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPRP12270 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPRP12270 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.05■□□□□ 0.32
TPRP12270 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.05■□□□□ 0.32
TPRP12270 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPRP12270 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.04■□□□□ 0.32
TPRP12270 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 RPS2P32-201ENST00000439199 892 ntBASIC17.04■□□□□ 0.32
TPRP12270 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.04■□□□□ 0.32
TPRP12270 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TPRP12270 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.04■□□□□ 0.32
TPRP12270 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.04■□□□□ 0.32
TPRP12270 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TPRP12270 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.04■□□□□ 0.32
TPRP12270 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TPRP12270 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.04■□□□□ 0.32
TPRP12270 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TPRP12270 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.04■□□□□ 0.32
TPRP12270 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.04■□□□□ 0.32
TPRP12270 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.04■□□□□ 0.32
TPRP12270 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TPRP12270 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TPRP12270 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.04■□□□□ 0.32
TPRP12270 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 AC006128.1-201ENST00000624704 1661 ntBASIC17.04■□□□□ 0.32
TPRP12270 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPRP12270 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TPRP12270 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TPRP12270 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.03■□□□□ 0.32
TPRP12270 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.03■□□□□ 0.32
TPRP12270 UGT1A2P-201ENST00000454886 866 ntBASIC17.03■□□□□ 0.32
TPRP12270 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.03■□□□□ 0.32
TPRP12270 HILS1-202ENST00000545329 423 ntBASIC17.03■□□□□ 0.32
TPRP12270 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.03■□□□□ 0.32
TPRP12270 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.03■□□□□ 0.32
TPRP12270 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPRP12270 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.03■□□□□ 0.32
TPRP12270 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPRP12270 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPRP12270 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPRP12270 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.03■□□□□ 0.32
TPRP12270 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.03■□□□□ 0.32
TPRP12270 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TPRP12270 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.03■□□□□ 0.32
TPRP12270 MIR1909-201ENST00000411312 80 ntBASIC17.03■□□□□ 0.32
TPRP12270 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.03■□□□□ 0.32
TPRP12270 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPRP12270 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPRP12270 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.03■□□□□ 0.32
TPRP12270 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TPRP12270 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPRP12270 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms