Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ADK-206ENST00000541550 2222 ntTSL 2 BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 RNA5SP415-201ENST00000517246 115 ntBASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 Z83851.2-201ENST00000609564 659 ntBASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 AC093484.2-201ENST00000580996 2166 ntBASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CSB-PGBD3P0DP91 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 LBH-204ENST00000406087 559 ntTSL 4 BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 UPF3AP3-201ENST00000420996 769 ntBASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 AC025062.2-201ENST00000605477 670 ntBASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CSB-PGBD3P0DP91 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 AL591424.1-201ENST00000442569 1213 ntBASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 KRT18P3-201ENST00000451602 1288 ntBASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 NMU-202ENST00000505262 693 ntTSL 3 BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSB-PGBD3P0DP91 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 AL161938.1-201ENST00000569833 2180 ntBASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 INIP-202ENST00000374236 874 ntTSL 2 BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 SNAI3-AS1-205ENST00000568633 2096 ntBASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CSB-PGBD3P0DP91 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 RPS8P6-201ENST00000426177 609 ntBASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms