Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SEMA3EO15041 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SEMA3EO15041 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
SEMA3EO15041 AC079781.3-201ENST00000449110 356 ntBASIC21.91■■□□□ 1.1
SEMA3EO15041 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.91■■□□□ 1.1
SEMA3EO15041 SAPCD2P3-201ENST00000455031 850 ntBASIC21.91■■□□□ 1.1
SEMA3EO15041 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SEMA3EO15041 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SEMA3EO15041 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SEMA3EO15041 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SEMA3EO15041 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
SEMA3EO15041 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SEMA3EO15041 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SEMA3EO15041 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SEMA3EO15041 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SEMA3EO15041 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.9■■□□□ 1.1
SEMA3EO15041 AC125634.1-201ENST00000438758 1403 ntBASIC21.9■■□□□ 1.1
SEMA3EO15041 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.9■■□□□ 1.1
SEMA3EO15041 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SEMA3EO15041 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SEMA3EO15041 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.9■■□□□ 1.1
SEMA3EO15041 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SEMA3EO15041 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SEMA3EO15041 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
SEMA3EO15041 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.9■■□□□ 1.1
SEMA3EO15041 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.9■■□□□ 1.1
SEMA3EO15041 AL121912.1-201ENST00000603683 238 ntBASIC21.9■■□□□ 1.1
SEMA3EO15041 AL591684.3-201ENST00000605187 298 ntBASIC21.9■■□□□ 1.1
SEMA3EO15041 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SEMA3EO15041 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SEMA3EO15041 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SEMA3EO15041 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SEMA3EO15041 TP73-AS1-210ENST00000637775 1455 ntBASIC21.9■■□□□ 1.1
SEMA3EO15041 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SEMA3EO15041 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SEMA3EO15041 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SEMA3EO15041 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SEMA3EO15041 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SEMA3EO15041 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SEMA3EO15041 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.89■■□□□ 1.09
SEMA3EO15041 AC112698.1-201ENST00000510299 916 ntBASIC21.89■■□□□ 1.09
SEMA3EO15041 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.89■■□□□ 1.09
SEMA3EO15041 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.89■■□□□ 1.09
SEMA3EO15041 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.89■■□□□ 1.09
SEMA3EO15041 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SEMA3EO15041 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.89■■□□□ 1.09
SEMA3EO15041 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SEMA3EO15041 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.89■■□□□ 1.09
SEMA3EO15041 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SEMA3EO15041 AP000974.1-201ENST00000623909 2387 ntBASIC21.89■■□□□ 1.09
SEMA3EO15041 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.89■■□□□ 1.09
SEMA3EO15041 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.89■■□□□ 1.09
SEMA3EO15041 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SEMA3EO15041 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEMA3EO15041 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.88■■□□□ 1.09
SEMA3EO15041 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SEMA3EO15041 AC132938.6-201ENST00000623828 1655 ntBASIC21.88■■□□□ 1.09
SEMA3EO15041 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEMA3EO15041 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEMA3EO15041 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SEMA3EO15041 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.88■■□□□ 1.09
SEMA3EO15041 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SEMA3EO15041 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEMA3EO15041 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.88■■□□□ 1.09
SEMA3EO15041 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEMA3EO15041 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SEMA3EO15041 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.88■■□□□ 1.09
SEMA3EO15041 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.88■■□□□ 1.09
SEMA3EO15041 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.88■■□□□ 1.09
SEMA3EO15041 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.88■■□□□ 1.09
SEMA3EO15041 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.88■■□□□ 1.09
SEMA3EO15041 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.88■■□□□ 1.09
SEMA3EO15041 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.88■■□□□ 1.09
SEMA3EO15041 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.88■■□□□ 1.09
SEMA3EO15041 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEMA3EO15041 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SEMA3EO15041 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEMA3EO15041 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.88■■□□□ 1.09
SEMA3EO15041 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SEMA3EO15041 AL020996.1-203ENST00000536896 2307 ntBASIC21.88■■□□□ 1.09
SEMA3EO15041 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SEMA3EO15041 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SEMA3EO15041 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SEMA3EO15041 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SEMA3EO15041 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SEMA3EO15041 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.87■■□□□ 1.09
SEMA3EO15041 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.87■■□□□ 1.09
SEMA3EO15041 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SEMA3EO15041 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.87■■□□□ 1.09
SEMA3EO15041 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SEMA3EO15041 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SEMA3EO15041 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SEMA3EO15041 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SEMA3EO15041 RCN1P2-201ENST00000398357 915 ntBASIC21.87■■□□□ 1.09
SEMA3EO15041 AC106795.1-205ENST00000512851 1056 ntBASIC21.87■■□□□ 1.09
SEMA3EO15041 AP002469.2-201ENST00000531724 424 ntBASIC21.87■■□□□ 1.09
SEMA3EO15041 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SEMA3EO15041 AC011467.2-201ENST00000598425 242 ntBASIC21.87■■□□□ 1.09
SEMA3EO15041 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SEMA3EO15041 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms