Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ATP2A1O14983 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A1O14983 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A1O14983 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2A1O14983 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2A1O14983 LINC01126-201ENST00000623515 1646 ntBASIC20.86■□□□□ 0.93
ATP2A1O14983 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.85■□□□□ 0.93
ATP2A1O14983 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A1O14983 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.85■□□□□ 0.93
ATP2A1O14983 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ATP2A1O14983 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.85■□□□□ 0.93
ATP2A1O14983 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.85■□□□□ 0.93
ATP2A1O14983 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
ATP2A1O14983 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A1O14983 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A1O14983 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A1O14983 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A1O14983 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ATP2A1O14983 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ATP2A1O14983 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ATP2A1O14983 HLA-A-201ENST00000376802 1334 ntBASIC20.84■□□□□ 0.93
ATP2A1O14983 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP2A1O14983 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2A1O14983 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP2A1O14983 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
ATP2A1O14983 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.84■□□□□ 0.93
ATP2A1O14983 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 MTCL1P1-201ENST00000446207 792 ntBASIC20.84■□□□□ 0.93
ATP2A1O14983 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
ATP2A1O14983 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.84■□□□□ 0.93
ATP2A1O14983 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP2A1O14983 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.84■□□□□ 0.93
ATP2A1O14983 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ATP2A1O14983 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.84■□□□□ 0.93
ATP2A1O14983 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2A1O14983 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
ATP2A1O14983 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP2A1O14983 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP2A1O14983 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A1O14983 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2A1O14983 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A1O14983 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A1O14983 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A1O14983 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A1O14983 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A1O14983 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A1O14983 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A1O14983 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A1O14983 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A1O14983 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2A1O14983 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP2A1O14983 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.83■□□□□ 0.93
ATP2A1O14983 AC096582.2-201ENST00000510860 516 ntBASIC20.83■□□□□ 0.93
ATP2A1O14983 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP2A1O14983 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2A1O14983 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2A1O14983 AL138831.2-201ENST00000606564 490 ntBASIC20.83■□□□□ 0.93
ATP2A1O14983 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP2A1O14983 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
ATP2A1O14983 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A1O14983 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A1O14983 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.83■□□□□ 0.93
ATP2A1O14983 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP2A1O14983 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2A1O14983 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.83■□□□□ 0.92
ATP2A1O14983 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2A1O14983 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2A1O14983 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP2A1O14983 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A1O14983 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ATP2A1O14983 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ATP2A1O14983 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A1O14983 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms