Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CHD1O14646 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
CHD1O14646 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CHD1O14646 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CHD1O14646 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC29.38■■■□□ 2.29
CHD1O14646 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC29.38■■■□□ 2.29
CHD1O14646 USP39-204ENST00000409766 2033 ntTSL 2 BASIC29.38■■■□□ 2.29
CHD1O14646 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CHD1O14646 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CHD1O14646 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
CHD1O14646 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CHD1O14646 GK-202ENST00000378941 458 ntTSL 3 BASIC29.37■■■□□ 2.29
CHD1O14646 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CHD1O14646 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC29.37■■■□□ 2.29
CHD1O14646 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC29.37■■■□□ 2.29
CHD1O14646 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CHD1O14646 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
CHD1O14646 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CHD1O14646 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC29.37■■■□□ 2.29
CHD1O14646 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CHD1O14646 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
CHD1O14646 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CHD1O14646 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CHD1O14646 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CHD1O14646 AC002472.2-201ENST00000442739 958 ntBASIC29.37■■■□□ 2.29
CHD1O14646 RPS15P9-201ENST00000494093 319 ntBASIC29.37■■■□□ 2.29
CHD1O14646 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC29.37■■■□□ 2.29
CHD1O14646 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC29.37■■■□□ 2.29
CHD1O14646 AC004877.2-201ENST00000623941 599 ntBASIC29.37■■■□□ 2.29
CHD1O14646 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC29.37■■■□□ 2.29
CHD1O14646 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
CHD1O14646 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHD1O14646 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHD1O14646 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CHD1O14646 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
CHD1O14646 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC29.36■■■□□ 2.29
CHD1O14646 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC29.36■■■□□ 2.29
CHD1O14646 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC29.36■■■□□ 2.29
CHD1O14646 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CHD1O14646 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC29.35■■■□□ 2.29
CHD1O14646 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC29.35■■■□□ 2.29
CHD1O14646 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHD1O14646 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC29.35■■■□□ 2.29
CHD1O14646 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC29.35■■■□□ 2.29
CHD1O14646 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC29.35■■■□□ 2.29
CHD1O14646 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHD1O14646 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHD1O14646 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC29.35■■■□□ 2.29
CHD1O14646 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
CHD1O14646 ACTG1P14-201ENST00000446382 1122 ntBASIC29.35■■■□□ 2.29
CHD1O14646 GAPDHP21-201ENST00000450301 1010 ntBASIC29.35■■■□□ 2.29
CHD1O14646 PRYP5-201ENST00000451909 266 ntBASIC29.35■■■□□ 2.29
CHD1O14646 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC29.35■■■□□ 2.29
CHD1O14646 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CHD1O14646 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC29.35■■■□□ 2.29
CHD1O14646 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CHD1O14646 IGHV3-65-201ENST00000523210 341 ntBASIC29.35■■■□□ 2.29
CHD1O14646 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC29.35■■■□□ 2.29
CHD1O14646 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC29.35■■■□□ 2.29
CHD1O14646 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC29.35■■■□□ 2.29
CHD1O14646 TK1-204ENST00000590430 683 ntTSL 3 BASIC29.35■■■□□ 2.29
CHD1O14646 AL589182.2-201ENST00000619332 1049 ntBASIC29.35■■■□□ 2.29
CHD1O14646 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
CHD1O14646 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
CHD1O14646 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CHD1O14646 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CHD1O14646 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
CHD1O14646 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC29.34■■■□□ 2.29
CHD1O14646 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC29.34■■■□□ 2.29
CHD1O14646 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
CHD1O14646 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CHD1O14646 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CHD1O14646 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHD1O14646 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
CHD1O14646 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CHD1O14646 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CHD1O14646 NAA60-208ENST00000570819 833 ntTSL 2 BASIC29.34■■■□□ 2.29
CHD1O14646 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHD1O14646 AC068137.2-201ENST00000605408 478 ntBASIC29.34■■■□□ 2.29
CHD1O14646 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHD1O14646 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC29.33■■■□□ 2.29
CHD1O14646 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CHD1O14646 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CHD1O14646 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CHD1O14646 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC29.33■■■□□ 2.29
CHD1O14646 AC010460.3-201ENST00000511359 1579 ntBASIC29.33■■■□□ 2.29
CHD1O14646 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CHD1O14646 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CHD1O14646 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC29.33■■■□□ 2.29
CHD1O14646 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
CHD1O14646 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC29.33■■■□□ 2.29
CHD1O14646 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC29.33■■■□□ 2.29
CHD1O14646 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC29.33■■■□□ 2.29
CHD1O14646 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC29.33■■■□□ 2.29
CHD1O14646 SDHAP2-201ENST00000455183 2001 ntBASIC29.33■■■□□ 2.29
CHD1O14646 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC29.33■■■□□ 2.29
CHD1O14646 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CHD1O14646 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CHD1O14646 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CHD1O14646 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms