Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 AL023806.1-201ENST00000603994 1649 ntBASIC13.37□□□□□ -0.27
SMKR1H3BMG3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 AP001094.4-201ENST00000579008 2176 ntBASIC13.37□□□□□ -0.27
SMKR1H3BMG3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMKR1H3BMG3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 AC006015.1-201ENST00000429970 570 ntBASIC13.36□□□□□ -0.27
SMKR1H3BMG3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 HLA-A-209ENST00000638375 975 ntBASIC13.36□□□□□ -0.27
SMKR1H3BMG3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.36□□□□□ -0.27
SMKR1H3BMG3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SMKR1H3BMG3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms