Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RIMBP3Q9UFD9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
RIMBP3Q9UFD9 SPDYE21P-201ENST00000413323 827 ntBASIC28.86■■■□□ 2.21
RIMBP3Q9UFD9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC28.86■■■□□ 2.21
RIMBP3Q9UFD9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC28.86■■■□□ 2.21
RIMBP3Q9UFD9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC28.86■■■□□ 2.21
RIMBP3Q9UFD9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC28.86■■■□□ 2.21
RIMBP3Q9UFD9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC28.86■■■□□ 2.21
RIMBP3Q9UFD9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC28.86■■■□□ 2.21
RIMBP3Q9UFD9 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC28.86■■■□□ 2.21
RIMBP3Q9UFD9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
RIMBP3Q9UFD9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC28.86■■■□□ 2.21
RIMBP3Q9UFD9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 REXO1L3P-201ENST00000622202 1288 ntBASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
RIMBP3Q9UFD9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC28.84■■■□□ 2.21
RIMBP3Q9UFD9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 WRB-204ENST00000398753 699 ntTSL 3 BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 AL662799.1-202ENST00000614205 422 ntBASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 FO538757.1-201ENST00000623083 1397 ntBASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 AC008687.5-201ENST00000593746 558 ntBASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RIMBP3Q9UFD9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 TREML5P-201ENST00000421694 576 ntBASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RIMBP3Q9UFD9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 AC007967.3-201ENST00000434308 558 ntBASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 AC233723.2-201ENST00000623798 2106 ntBASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 TEX21P-204ENST00000641479 1693 ntBASIC28.81■■■□□ 2.2
RIMBP3Q9UFD9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
RIMBP3Q9UFD9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
RIMBP3Q9UFD9 AC107890.1-201ENST00000422478 521 ntBASIC28.8■■■□□ 2.2
RIMBP3Q9UFD9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC28.8■■■□□ 2.2
RIMBP3Q9UFD9 SERBP1P5-201ENST00000510079 1181 ntBASIC28.8■■■□□ 2.2
RIMBP3Q9UFD9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC28.8■■■□□ 2.2
RIMBP3Q9UFD9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms