Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.58■□□□□ 0.41
SPHK1Q9NYA1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPHK1Q9NYA1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPHK1Q9NYA1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPHK1Q9NYA1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPHK1Q9NYA1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.58■□□□□ 0.41
SPHK1Q9NYA1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPHK1Q9NYA1 AL020996.1-203ENST00000536896 2307 ntBASIC17.58■□□□□ 0.41
SPHK1Q9NYA1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 AC069148.1-201ENST00000608741 768 ntBASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 AC004263.2-201ENST00000617183 678 ntBASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.58■□□□□ 0.4
SPHK1Q9NYA1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 BX276092.5-203ENST00000456199 560 ntBASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 KRT8P26-201ENST00000534154 1276 ntBASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPHK1Q9NYA1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 AC090164.3-201ENST00000610780 2143 ntBASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 AL121672.3-201ENST00000608644 468 ntBASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms