Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 SAPCD2P3-201ENST00000455031 850 ntBASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 MIR5100-201ENST00000579544 119 ntBASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 AL591684.3-201ENST00000605187 298 ntBASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK2Q9NRA0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 AC114341.1-201ENST00000618070 349 ntBASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 GMCL1P1-201ENST00000463439 1581 ntBASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.59■□□□□ 0.57
SPHK2Q9NRA0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPHK2Q9NRA0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.58■□□□□ 0.57
SPHK2Q9NRA0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPHK2Q9NRA0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPHK2Q9NRA0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPHK2Q9NRA0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SPHK2Q9NRA0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.58■□□□□ 0.57
SPHK2Q9NRA0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SPHK2Q9NRA0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPHK2Q9NRA0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 KRT18P65-201ENST00000439811 1286 ntBASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 AP002469.2-201ENST00000531724 424 ntBASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPHK2Q9NRA0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK2Q9NRA0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms