Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 AC012306.2-201ENST00000609350 630 ntBASIC18.85■□□□□ 0.61
C9orf72Q96LT7 AL031985.4-201ENST00000642138 673 ntBASIC18.85■□□□□ 0.61
C9orf72Q96LT7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf72Q96LT7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 FAM210CP-201ENST00000445714 574 ntBASIC18.84■□□□□ 0.61
C9orf72Q96LT7 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.84■□□□□ 0.61
C9orf72Q96LT7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf72Q96LT7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
C9orf72Q96LT7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
C9orf72Q96LT7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.83■□□□□ 0.61
C9orf72Q96LT7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
C9orf72Q96LT7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
C9orf72Q96LT7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
C9orf72Q96LT7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
C9orf72Q96LT7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.61
C9orf72Q96LT7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
C9orf72Q96LT7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.83■□□□□ 0.61
C9orf72Q96LT7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
C9orf72Q96LT7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.83■□□□□ 0.61
C9orf72Q96LT7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.83■□□□□ 0.6
C9orf72Q96LT7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 AP000525.1-201ENST00000608286 694 ntBASIC18.83■□□□□ 0.6
C9orf72Q96LT7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
C9orf72Q96LT7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 AC004951.3-201ENST00000418645 1148 ntBASIC18.82■□□□□ 0.6
C9orf72Q96LT7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 AC099343.3-201ENST00000605834 2503 ntBASIC18.82■□□□□ 0.6
C9orf72Q96LT7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms