Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 ANO7L1-203ENST00000602586 1720 ntBASIC20.19■□□□□ 0.82
MMP3P08254 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MMP3P08254 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP3P08254 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.19■□□□□ 0.82
MMP3P08254 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
MMP3P08254 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP3P08254 RBM17P3-201ENST00000417687 1192 ntBASIC20.19■□□□□ 0.82
MMP3P08254 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.19■□□□□ 0.82
MMP3P08254 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.19■□□□□ 0.82
MMP3P08254 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP3P08254 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP3P08254 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.19■□□□□ 0.82
MMP3P08254 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP3P08254 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.19■□□□□ 0.82
MMP3P08254 AF228730.7-201ENST00000641842 219 ntBASIC20.19■□□□□ 0.82
MMP3P08254 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP3P08254 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP3P08254 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP3P08254 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP3P08254 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MMP3P08254 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.19■□□□□ 0.82
MMP3P08254 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP3P08254 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP3P08254 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP3P08254 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
MMP3P08254 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP3P08254 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP3P08254 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP3P08254 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP3P08254 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP3P08254 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP3P08254 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.18■□□□□ 0.82
MMP3P08254 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP3P08254 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MMP3P08254 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP3P08254 SLC25A1P1-201ENST00000528351 927 ntBASIC20.18■□□□□ 0.82
MMP3P08254 MTDHP3-201ENST00000594186 672 ntBASIC20.18■□□□□ 0.82
MMP3P08254 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.18■□□□□ 0.82
MMP3P08254 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP3P08254 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP3P08254 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP3P08254 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
MMP3P08254 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP3P08254 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MMP3P08254 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
MMP3P08254 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP3P08254 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP3P08254 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP3P08254 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MMP3P08254 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
MMP3P08254 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MMP3P08254 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP3P08254 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP3P08254 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.17■□□□□ 0.82
MMP3P08254 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MMP3P08254 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MMP3P08254 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP3P08254 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.17■□□□□ 0.82
MMP3P08254 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MMP3P08254 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP3P08254 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP3P08254 MIR7706-201ENST00000613747 67 ntBASIC20.17■□□□□ 0.82
MMP3P08254 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP3P08254 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP3P08254 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP3P08254 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP3P08254 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
MMP3P08254 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MMP3P08254 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP3P08254 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP3P08254 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MMP3P08254 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP3P08254 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP3P08254 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP3P08254 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP3P08254 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP3P08254 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP3P08254 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP3P08254 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.16■□□□□ 0.82
MMP3P08254 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
MMP3P08254 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP3P08254 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP3P08254 RNPS1P1-201ENST00000507437 918 ntBASIC20.16■□□□□ 0.82
MMP3P08254 AC073648.2-201ENST00000510116 352 ntBASIC20.16■□□□□ 0.82
MMP3P08254 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP3P08254 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.16■□□□□ 0.82
MMP3P08254 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.16■□□□□ 0.82
MMP3P08254 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
MMP3P08254 AL049840.3-201ENST00000602669 611 ntBASIC20.16■□□□□ 0.82
MMP3P08254 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.16■□□□□ 0.82
MMP3P08254 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP3P08254 AC243591.1-201ENST00000452967 1364 ntBASIC20.16■□□□□ 0.82
MMP3P08254 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.16■□□□□ 0.82
MMP3P08254 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP3P08254 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP3P08254 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP3P08254 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP3P08254 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MMP3P08254 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP3P08254 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms