Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 MED16-201ENST00000269814 1199 ntTSL 5 BASIC28.38■■■□□ 2.13
PCF11O94913 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
PCF11O94913 COX10-202ENST00000429152 875 ntTSL 2 BASIC28.38■■■□□ 2.13
PCF11O94913 AC112698.1-201ENST00000510299 916 ntBASIC28.38■■■□□ 2.13
PCF11O94913 MIR5100-201ENST00000579544 119 ntBASIC28.38■■■□□ 2.13
PCF11O94913 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PCF11O94913 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC28.38■■■□□ 2.13
PCF11O94913 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PCF11O94913 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCF11O94913 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCF11O94913 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCF11O94913 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC28.38■■■□□ 2.13
PCF11O94913 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PCF11O94913 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCF11O94913 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCF11O94913 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCF11O94913 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCF11O94913 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCF11O94913 FAM197Y8-203ENST00000450145 560 ntBASIC28.37■■■□□ 2.13
PCF11O94913 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC28.37■■■□□ 2.13
PCF11O94913 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC28.37■■■□□ 2.13
PCF11O94913 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC28.37■■■□□ 2.13
PCF11O94913 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC28.37■■■□□ 2.13
PCF11O94913 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC28.37■■■□□ 2.13
PCF11O94913 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PCF11O94913 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC28.37■■■□□ 2.13
PCF11O94913 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCF11O94913 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCF11O94913 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC28.37■■■□□ 2.13
PCF11O94913 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCF11O94913 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
PCF11O94913 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC28.37■■■□□ 2.13
PCF11O94913 MOK-208ENST00000519058 917 ntTSL 2 BASIC28.37■■■□□ 2.13
PCF11O94913 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC28.37■■■□□ 2.13
PCF11O94913 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCF11O94913 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC28.36■■■□□ 2.13
PCF11O94913 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC28.36■■■□□ 2.13
PCF11O94913 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PCF11O94913 AL031284.1-201ENST00000419297 478 ntBASIC28.36■■■□□ 2.13
PCF11O94913 RBSN-204ENST00000449050 903 ntTSL 2 BASIC28.36■■■□□ 2.13
PCF11O94913 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC28.36■■■□□ 2.13
PCF11O94913 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC28.36■■■□□ 2.13
PCF11O94913 AC027796.2-201ENST00000575326 344 ntBASIC28.36■■■□□ 2.13
PCF11O94913 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC28.36■■■□□ 2.13
PCF11O94913 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCF11O94913 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
PCF11O94913 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
PCF11O94913 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCF11O94913 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC28.35■■■□□ 2.13
PCF11O94913 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCF11O94913 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC28.35■■■□□ 2.13
PCF11O94913 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCF11O94913 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC28.35■■■□□ 2.13
PCF11O94913 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCF11O94913 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCF11O94913 SART3-203ENST00000546611 1184 ntBASIC28.35■■■□□ 2.13
PCF11O94913 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC28.35■■■□□ 2.13
PCF11O94913 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
PCF11O94913 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC28.35■■■□□ 2.13
PCF11O94913 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
PCF11O94913 SLC25A24-204ENST00000569674 2357 ntBASIC28.35■■■□□ 2.13
PCF11O94913 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
PCF11O94913 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC28.35■■■□□ 2.13
PCF11O94913 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCF11O94913 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
PCF11O94913 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCF11O94913 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCF11O94913 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCF11O94913 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PCF11O94913 KIRREL3-AS3-201ENST00000404882 831 ntBASIC28.34■■■□□ 2.13
PCF11O94913 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC28.34■■■□□ 2.13
PCF11O94913 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC28.34■■■□□ 2.13
PCF11O94913 POLD2P1-201ENST00000511220 997 ntBASIC28.34■■■□□ 2.13
PCF11O94913 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCF11O94913 CYGB-205ENST00000590175 830 ntTSL 3 BASIC28.34■■■□□ 2.13
PCF11O94913 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC28.34■■■□□ 2.13
PCF11O94913 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC28.34■■■□□ 2.13
PCF11O94913 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
PCF11O94913 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC28.34■■■□□ 2.13
PCF11O94913 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC28.34■■■□□ 2.13
PCF11O94913 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC28.33■■■□□ 2.13
PCF11O94913 TLE1-202ENST00000376484 666 ntTSL 3 BASIC28.33■■■□□ 2.13
PCF11O94913 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC28.33■■■□□ 2.13
PCF11O94913 AC009533.2-201ENST00000543664 586 ntBASIC28.33■■■□□ 2.13
PCF11O94913 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCF11O94913 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
PCF11O94913 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC28.33■■■□□ 2.13
PCF11O94913 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCF11O94913 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCF11O94913 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC28.33■■■□□ 2.13
PCF11O94913 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCF11O94913 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC28.33■■■□□ 2.12
PCF11O94913 HNRNPDP1-201ENST00000439535 754 ntBASIC28.33■■■□□ 2.12
PCF11O94913 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC28.33■■■□□ 2.12
PCF11O94913 DANCR-204ENST00000444958 709 ntTSL 3 BASIC28.33■■■□□ 2.12
PCF11O94913 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC28.33■■■□□ 2.12
PCF11O94913 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC28.33■■■□□ 2.12
PCF11O94913 AC140113.2-201ENST00000604370 208 ntBASIC28.33■■■□□ 2.12
PCF11O94913 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
PCF11O94913 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC28.32■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms