Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
USH2AO75445 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 BASP1P1-201ENST00000430708 665 ntBASIC8.11□□□□□ -1.11
USH2AO75445 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC8.11□□□□□ -1.11
USH2AO75445 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC8.11□□□□□ -1.11
USH2AO75445 VPS29-207ENST00000549970 818 ntTSL 3 BASIC8.11□□□□□ -1.11
USH2AO75445 ETFA-208ENST00000559602 792 ntTSL 3 BASIC8.11□□□□□ -1.11
USH2AO75445 CYB561-217ENST00000582997 877 ntTSL 5 BASIC8.11□□□□□ -1.11
USH2AO75445 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC8.11□□□□□ -1.11
USH2AO75445 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC8.11□□□□□ -1.11
USH2AO75445 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
USH2AO75445 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
USH2AO75445 AL121761.2-201ENST00000598007 1648 ntBASIC8.11□□□□□ -1.11
USH2AO75445 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC8.11□□□□□ -1.11
USH2AO75445 COX5BP8-201ENST00000416911 349 ntBASIC8.11□□□□□ -1.11
USH2AO75445 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC8.11□□□□□ -1.11
USH2AO75445 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC8.11□□□□□ -1.11
USH2AO75445 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
USH2AO75445 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC8.11□□□□□ -1.11
USH2AO75445 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC8.11□□□□□ -1.11
USH2AO75445 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC8.1□□□□□ -1.11
USH2AO75445 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC8.1□□□□□ -1.11
USH2AO75445 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
USH2AO75445 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC8.1□□□□□ -1.11
USH2AO75445 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC8.1□□□□□ -1.11
USH2AO75445 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
USH2AO75445 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC8.1□□□□□ -1.11
USH2AO75445 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC8.1□□□□□ -1.11
USH2AO75445 FAM58DP-201ENST00000428076 619 ntBASIC8.1□□□□□ -1.11
USH2AO75445 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC8.1□□□□□ -1.11
USH2AO75445 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC8.1□□□□□ -1.11
USH2AO75445 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
USH2AO75445 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
USH2AO75445 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 AC003669.1-201ENST00000334569 611 ntBASIC8.1□□□□□ -1.11
USH2AO75445 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
USH2AO75445 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
USH2AO75445 CENPM-205ENST00000404067 905 ntTSL 3 BASIC8.1□□□□□ -1.11
USH2AO75445 ADH5P3-201ENST00000433842 1137 ntBASIC8.1□□□□□ -1.11
USH2AO75445 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC8.1□□□□□ -1.11
USH2AO75445 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
USH2AO75445 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
USH2AO75445 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC8.1□□□□□ -1.11
USH2AO75445 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC8.1□□□□□ -1.11
USH2AO75445 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
USH2AO75445 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC8.1□□□□□ -1.11
USH2AO75445 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC8.1□□□□□ -1.11
USH2AO75445 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC8.1□□□□□ -1.11
USH2AO75445 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC8.1□□□□□ -1.11
USH2AO75445 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
USH2AO75445 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC8.1□□□□□ -1.11
USH2AO75445 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC8.1□□□□□ -1.11
USH2AO75445 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
USH2AO75445 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC8.1□□□□□ -1.11
USH2AO75445 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC8.1□□□□□ -1.11
USH2AO75445 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC8.1□□□□□ -1.11
USH2AO75445 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USH2AO75445 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USH2AO75445 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC8.09□□□□□ -1.11
USH2AO75445 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USH2AO75445 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USH2AO75445 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC8.09□□□□□ -1.11
USH2AO75445 COQ9-214ENST00000567933 882 ntTSL 3 BASIC8.09□□□□□ -1.11
USH2AO75445 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms