Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
FOXN1O15353 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 SDHAP1-207ENST00000440850 2000 ntBASIC21.8■■□□□ 1.08
FOXN1O15353 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXN1O15353 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.8■■□□□ 1.08
FOXN1O15353 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
FOXN1O15353 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
FOXN1O15353 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
FOXN1O15353 AC211486.1-202ENST00000416371 468 ntBASIC21.8■■□□□ 1.08
FOXN1O15353 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.8■■□□□ 1.08
FOXN1O15353 AP006288.1-201ENST00000446065 395 ntBASIC21.8■■□□□ 1.08
FOXN1O15353 AC211476.1-201ENST00000503899 468 ntBASIC21.8■■□□□ 1.08
FOXN1O15353 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.8■■□□□ 1.08
FOXN1O15353 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
FOXN1O15353 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
FOXN1O15353 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXN1O15353 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXN1O15353 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXN1O15353 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
FOXN1O15353 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
FOXN1O15353 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXN1O15353 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXN1O15353 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXN1O15353 AC036111.1-201ENST00000533973 1582 ntBASIC21.79■■□□□ 1.08
FOXN1O15353 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.79■■□□□ 1.08
FOXN1O15353 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
FOXN1O15353 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXN1O15353 MIR770-201ENST00000390219 98 ntBASIC21.79■■□□□ 1.08
FOXN1O15353 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXN1O15353 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.79■■□□□ 1.08
FOXN1O15353 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.79■■□□□ 1.08
FOXN1O15353 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.79■■□□□ 1.08
FOXN1O15353 PAWRP1-201ENST00000451083 565 ntBASIC21.79■■□□□ 1.08
FOXN1O15353 MINOS1P3-201ENST00000457048 203 ntBASIC21.79■■□□□ 1.08
FOXN1O15353 AP003733.1-201ENST00000491725 852 ntBASIC21.79■■□□□ 1.08
FOXN1O15353 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.79■■□□□ 1.08
FOXN1O15353 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.79■■□□□ 1.08
FOXN1O15353 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXN1O15353 AC124864.1-201ENST00000623408 392 ntBASIC21.79■■□□□ 1.08
FOXN1O15353 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
FOXN1O15353 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.79■■□□□ 1.08
FOXN1O15353 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.79■■□□□ 1.08
FOXN1O15353 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXN1O15353 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.79■■□□□ 1.08
FOXN1O15353 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXN1O15353 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN1O15353 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN1O15353 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN1O15353 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN1O15353 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN1O15353 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
FOXN1O15353 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.78■■□□□ 1.08
FOXN1O15353 VENTXP7-201ENST00000475503 772 ntBASIC21.78■■□□□ 1.08
FOXN1O15353 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN1O15353 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
FOXN1O15353 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.78■■□□□ 1.08
FOXN1O15353 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN1O15353 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXN1O15353 MIR1199-201ENST00000621445 119 ntBASIC21.78■■□□□ 1.08
FOXN1O15353 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.78■■□□□ 1.08
FOXN1O15353 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN1O15353 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
FOXN1O15353 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXN1O15353 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
FOXN1O15353 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN1O15353 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXN1O15353 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
FOXN1O15353 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.77■■□□□ 1.08
FOXN1O15353 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
FOXN1O15353 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.77■■□□□ 1.08
FOXN1O15353 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
FOXN1O15353 AC004832.2-201ENST00000426397 482 ntBASIC21.77■■□□□ 1.08
FOXN1O15353 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXN1O15353 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms