Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.59■□□□□ 0.73
FOXN3O00409 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.59■□□□□ 0.73
FOXN3O00409 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXN3O00409 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXN3O00409 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.59■□□□□ 0.73
FOXN3O00409 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
FOXN3O00409 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN3O00409 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN3O00409 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN3O00409 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN3O00409 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.58■□□□□ 0.73
FOXN3O00409 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.58■□□□□ 0.73
FOXN3O00409 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN3O00409 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN3O00409 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN3O00409 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN3O00409 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
FOXN3O00409 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
FOXN3O00409 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FOXN3O00409 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN3O00409 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN3O00409 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
FOXN3O00409 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
FOXN3O00409 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN3O00409 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN3O00409 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN3O00409 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN3O00409 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN3O00409 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN3O00409 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
FOXN3O00409 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
FOXN3O00409 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN3O00409 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN3O00409 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN3O00409 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN3O00409 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN3O00409 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN3O00409 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN3O00409 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
FOXN3O00409 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN3O00409 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXN3O00409 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.57■□□□□ 0.72
FOXN3O00409 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
FOXN3O00409 PCDHB18P-201ENST00000524813 2368 ntBASIC19.57■□□□□ 0.72
FOXN3O00409 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
FOXN3O00409 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 FLJ13224-201ENST00000313737 1514 ntBASIC19.57■□□□□ 0.72
FOXN3O00409 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.57■□□□□ 0.72
FOXN3O00409 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
FOXN3O00409 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
FOXN3O00409 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.57■□□□□ 0.72
FOXN3O00409 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.57■□□□□ 0.72
FOXN3O00409 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
FOXN3O00409 SLC25A3P1-201ENST00000443844 931 ntBASIC19.57■□□□□ 0.72
FOXN3O00409 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.57■□□□□ 0.72
FOXN3O00409 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.57■□□□□ 0.72
FOXN3O00409 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
FOXN3O00409 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 AC010203.1-204ENST00000548782 407 ntBASIC19.57■□□□□ 0.72
FOXN3O00409 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.57■□□□□ 0.72
FOXN3O00409 MIR3917-201ENST00000580971 93 ntBASIC19.57■□□□□ 0.72
FOXN3O00409 AC012306.2-201ENST00000609350 630 ntBASIC19.57■□□□□ 0.72
FOXN3O00409 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
FOXN3O00409 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
FOXN3O00409 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
FOXN3O00409 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
FOXN3O00409 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.57■□□□□ 0.72
FOXN3O00409 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN3O00409 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN3O00409 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXN3O00409 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN3O00409 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN3O00409 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXN3O00409 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN3O00409 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN3O00409 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN3O00409 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN3O00409 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN3O00409 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN3O00409 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN3O00409 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms