Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.84■□□□□ 0.93
SYCE3A1L190 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.84■□□□□ 0.93
SYCE3A1L190 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.84■□□□□ 0.93
SYCE3A1L190 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SYCE3A1L190 AC092437.1-201ENST00000624794 1048 ntBASIC20.84■□□□□ 0.93
SYCE3A1L190 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.84■□□□□ 0.93
SYCE3A1L190 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SYCE3A1L190 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
SYCE3A1L190 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SYCE3A1L190 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYCE3A1L190 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SYCE3A1L190 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SYCE3A1L190 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYCE3A1L190 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SYCE3A1L190 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SYCE3A1L190 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYCE3A1L190 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYCE3A1L190 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SYCE3A1L190 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.83■□□□□ 0.93
SYCE3A1L190 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SYCE3A1L190 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.83■□□□□ 0.93
SYCE3A1L190 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.83■□□□□ 0.93
SYCE3A1L190 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.83■□□□□ 0.93
SYCE3A1L190 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.83■□□□□ 0.93
SYCE3A1L190 AC083880.1-201ENST00000608266 535 ntBASIC20.83■□□□□ 0.93
SYCE3A1L190 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.83■□□□□ 0.93
SYCE3A1L190 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.83■□□□□ 0.93
SYCE3A1L190 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.83■□□□□ 0.93
SYCE3A1L190 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SYCE3A1L190 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYCE3A1L190 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SYCE3A1L190 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYCE3A1L190 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SYCE3A1L190 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.82■□□□□ 0.92
SYCE3A1L190 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.82■□□□□ 0.92
SYCE3A1L190 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.82■□□□□ 0.92
SYCE3A1L190 AC018695.7-201ENST00000624587 2492 ntBASIC20.82■□□□□ 0.92
SYCE3A1L190 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCE3A1L190 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.82■□□□□ 0.92
SYCE3A1L190 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCE3A1L190 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.82■□□□□ 0.92
SYCE3A1L190 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYCE3A1L190 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCE3A1L190 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.82■□□□□ 0.92
SYCE3A1L190 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.82■□□□□ 0.92
SYCE3A1L190 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.82■□□□□ 0.92
SYCE3A1L190 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.82■□□□□ 0.92
SYCE3A1L190 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCE3A1L190 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.82■□□□□ 0.92
SYCE3A1L190 AC004264.1-201ENST00000608354 794 ntBASIC20.82■□□□□ 0.92
SYCE3A1L190 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.82■□□□□ 0.92
SYCE3A1L190 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SYCE3A1L190 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCE3A1L190 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCE3A1L190 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYCE3A1L190 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SYCE3A1L190 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.81■□□□□ 0.92
SYCE3A1L190 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.81■□□□□ 0.92
SYCE3A1L190 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SYCE3A1L190 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.81■□□□□ 0.92
SYCE3A1L190 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.81■□□□□ 0.92
SYCE3A1L190 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.81■□□□□ 0.92
SYCE3A1L190 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SYCE3A1L190 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.81■□□□□ 0.92
SYCE3A1L190 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYCE3A1L190 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SYCE3A1L190 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SYCE3A1L190 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.8■□□□□ 0.92
SYCE3A1L190 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYCE3A1L190 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYCE3A1L190 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SYCE3A1L190 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYCE3A1L190 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.8■□□□□ 0.92
SYCE3A1L190 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYCE3A1L190 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYCE3A1L190 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.8■□□□□ 0.92
SYCE3A1L190 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms