Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.35■□□□□ 0.21
COPS3Q9UNS2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 MIR564-202ENST00000385049 94 ntBASIC16.34■□□□□ 0.21
COPS3Q9UNS2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 AL023284.2-201ENST00000405850 579 ntBASIC16.34■□□□□ 0.21
COPS3Q9UNS2 SLC25A6P5-201ENST00000435663 894 ntBASIC16.34■□□□□ 0.21
COPS3Q9UNS2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 RPPH1-201ENST00000516869 333 ntBASIC16.34■□□□□ 0.21
COPS3Q9UNS2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 AL096828.2-201ENST00000567259 1965 ntBASIC16.34■□□□□ 0.21
COPS3Q9UNS2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 GPAT2P1-201ENST00000444924 1672 ntBASIC16.34■□□□□ 0.21
COPS3Q9UNS2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.34■□□□□ 0.21
COPS3Q9UNS2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
COPS3Q9UNS2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
COPS3Q9UNS2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COPS3Q9UNS2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COPS3Q9UNS2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 RARRES2P10-201ENST00000564312 460 ntBASIC16.33■□□□□ 0.2
COPS3Q9UNS2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 MIR4651-201ENST00000582622 73 ntBASIC16.33■□□□□ 0.2
COPS3Q9UNS2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 AP000692.2-201ENST00000608391 879 ntBASIC16.33■□□□□ 0.2
COPS3Q9UNS2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.33■□□□□ 0.2
COPS3Q9UNS2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COPS3Q9UNS2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms