Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 MIR662-201ENST00000384847 95 ntBASIC20.79■□□□□ 0.92
TNFRSF25Q93038 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 AC024563.2-201ENST00000603282 481 ntBASIC20.79■□□□□ 0.92
TNFRSF25Q93038 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.79■□□□□ 0.92
TNFRSF25Q93038 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF25Q93038 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 FLJ13224-201ENST00000313737 1514 ntBASIC20.78■□□□□ 0.92
TNFRSF25Q93038 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 AP000997.3-201ENST00000623333 2250 ntBASIC20.78■□□□□ 0.92
TNFRSF25Q93038 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFRSF25Q93038 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.77■□□□□ 0.92
TNFRSF25Q93038 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 AC008764.6-201ENST00000595909 2069 ntBASIC20.77■□□□□ 0.92
TNFRSF25Q93038 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF25Q93038 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.77■□□□□ 0.91
TNFRSF25Q93038 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
TNFRSF25Q93038 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
TNFRSF25Q93038 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 NOC2LP2-201ENST00000407594 1944 ntBASIC20.76■□□□□ 0.91
TNFRSF25Q93038 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.76■□□□□ 0.91
TNFRSF25Q93038 AC092647.4-201ENST00000457211 535 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms