Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 UBE2SP1-201ENST00000450587 669 ntBASIC19■□□□□ 0.63
ATG4AQ8WYN0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 AL163051.1-201ENST00000569214 1512 ntBASIC19■□□□□ 0.63
ATG4AQ8WYN0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATG4AQ8WYN0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
ATG4AQ8WYN0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 AC012317.2-201ENST00000623305 2251 ntBASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 AC090340.1-201ENST00000620778 4980 ntBASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 AL355355.2-201ENST00000442321 338 ntBASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 AC026471.5-201ENST00000615068 467 ntBASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATG4AQ8WYN0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 Z99916.2-201ENST00000604037 246 ntBASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.98■□□□□ 0.63
ATG4AQ8WYN0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
ATG4AQ8WYN0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
ATG4AQ8WYN0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATG4AQ8WYN0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.97■□□□□ 0.63
ATG4AQ8WYN0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATG4AQ8WYN0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.97■□□□□ 0.63
ATG4AQ8WYN0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATG4AQ8WYN0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms